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RTP_01242018_0_2um_scaffold_3869_1

Organism: RTP_01242018_0_2um_Betaproteobacteria_47_58

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(2..679)

Top 3 Functional Annotations

Value Algorithm Source
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=864073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum frisingense GSF30.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.9
  • Coverage: 226.0
  • Bit_score: 379
  • Evalue 2.40e-102
thrS; threonyl-tRNA synthetase (EC:6.1.1.3) similarity KEGG
DB: KEGG
  • Identity: 80.5
  • Coverage: 226.0
  • Bit_score: 374
  • Evalue 2.10e-101
threonyl-tRNA synthetase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003775998 similarity UNIREF
DB: UNIREF100
  • Identity: 81.4
  • Coverage: 226.0
  • Bit_score: 382
  • Evalue 2.10e-103

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Taxonomy

Herbaspirillum frisingense → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 678
ATGTTGCACATTACTTTACCAGATGGTTCTATTCGTGAATTTCAACAACCCGTCACCGTTGCGGCGGTTGCCGCTACTATCGGTGCTGGATTAGCCAAGGCTGCGCTGGCAGGACGCGTAGATGGTCGATTGGTCGACACAAGTTATTTAATTGATACGAACGTACAATTAGCAATTATCACCGACAAAGACCCTGATGGTCTGGAAGTCATTCGGCATTCAACCGCGCATTTGTTGGCTTATGCAGTGAAGTCGTTATTTCCTGACGCACAAGTGACTATCGGCCCGGTGATAGAGGACGGTTTTTATTATGATTTCGCTTATAAACGTCCGTTCACACCTGACGATTTGCTCGCTATAGAGAAAAAAATGGCAGAGTTGGCAAAGCGTGATGAGGTGGTAACGCGTAGCATTATGCCACGTGATGCTGCGATAGCGTACTTCAACGGCCTGGGTGAGCACTACAAGGCTGAATTGATAGCCTCTATACCTGCCGGTGAAGATGTCTCCTTGTATGCTGAGGGTGGGTTTACTGATTTGTGCCGTGGTCCACATGTACCTTCAACAGGTAAGCTGAAGCATTTCAAATTAATGAAGCTGGCGGGTGCCTATTGGCGCGGTGACCATCGCAATGAGATGCTGCAACGGGTGTATGGTACGGCTTGGGCTAAGAAAGAA
PROTEIN sequence
Length: 226
MLHITLPDGSIREFQQPVTVAAVAATIGAGLAKAALAGRVDGRLVDTSYLIDTNVQLAIITDKDPDGLEVIRHSTAHLLAYAVKSLFPDAQVTIGPVIEDGFYYDFAYKRPFTPDDLLAIEKKMAELAKRDEVVTRSIMPRDAAIAYFNGLGEHYKAELIASIPAGEDVSLYAEGGFTDLCRGPHVPSTGKLKHFKLMKLAGAYWRGDHRNEMLQRVYGTAWAKKE