Consensus taxonomy: Betaproteobacteria → Proteobacteria → Bacteria
Taxonomy override: Betaproteobacteria
Contig (seq size) | Coding Density (%) | Species | Genus | Order | Class | Phylum | Domain |
---|---|---|---|---|---|---|---|
RTP_01242018_0_2um_scaffold_3959
2496 bp | 45.97 x | 46.07% |
0.978365 |
R_Methylotenera_4...
100.00%
|
unknown
100.00%
|
Methylophilales
100.00%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_01242018_0_2um_scaffold_3968
2493 bp | 69.01 x | 49.14% |
0.978339 |
RBG_16_Betaproteo...
33.33%
|
unknown
66.67%
|
Hydrogenophilales
33.33%
|
Betaproteobacteria
66.67%
|
Proteobacteria
66.67%
|
Bacteria
66.67%
|
RTP_01242018_0_2um_scaffold_3971
2492 bp | 50.38 x | 44.50% |
0.971509 |
Sideroxydans lith...
25.00%
|
unknown
75.00%
|
Gallionellales
50.00%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_01242018_0_2um_scaffold_3980
2490 bp | 47.17 x | 47.07% |
0.998795 |
RBG_16_Betaproteo...
100.00%
|
unknown
100.00%
|
Hydrogenophilales
100.00%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_01242018_0_2um_scaffold_4040
2454 bp | 48.41 x | 47.07% |
0.959658 |
mine drainage met...
50.00%
|
unknown
75.00%
|
unknown
50.00%
|
Betaproteobacteria
50.00%
|
Proteobacteria
50.00%
|
Bacteria
50.00%
|
RTP_01242018_0_2um_scaffold_4065
2442 bp | 51.54 x | 40.50% |
0.767813 |
unknown
50.00%
|
unknown
66.67%
|
unknown
66.67%
|
unknown
66.67%
|
unknown
66.67%
|
unknown
66.67%
|
RTP_01242018_0_2um_scaffold_4124
2411 bp | 68.50 x | 49.36% |
0.994193 |
Sulfuricella sp. T08
50.00%
|
Sulfuricella
50.00%
|
Sulfuricellales
50.00%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_01242018_0_2um_scaffold_4126
2410 bp | 47.05 x | 44.61% |
0.921162 |
Methyloversatilis...
25.00%
|
unknown
50.00%
|
Gallionellales
50.00%
|
Betaproteobacteria
75.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_01242018_0_2um_scaffold_4128
2409 bp | 50.19 x | 49.11% |
0.867995 |
Herbaspirillum sp...
20.00%
|
unknown
80.00%
|
unknown
60.00%
|
Betaproteobacteria
60.00%
|
Proteobacteria
80.00%
|
Bacteria
80.00%
|
RTP_01242018_0_2um_scaffold_4314
2313 bp | 42.28 x | 47.64% |
0.920882 |
unknown
40.00%
|
unknown
80.00%
|
unknown
60.00%
|
Betaproteobacteria
40.00%
|
Proteobacteria
40.00%
|
Bacteria
60.00%
|
RTP_01242018_0_2um_scaffold_4393
2276 bp | 47.91 x | 48.02% |
0.763181 |
Aeromonas veronii
33.33%
|
Aeromonas
33.33%
|
Aeromonadales
33.33%
|
Betaproteobacteria
66.67%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_01242018_0_2um_scaffold_4470
2247 bp | 61.48 x | 51.54% |
0.993324 |
Burkholderia sp. ...
33.33%
|
unknown
66.67%
|
Hydrogenophilales
66.67%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_01242018_0_2um_scaffold_4516
2232 bp | 39.78 x | 43.50% |
0.982527 |
R_Methylotenera_4...
50.00%
|
Methylotenera
50.00%
|
Methylophilales
100.00%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_01242018_0_2um_scaffold_4608
2187 bp | 54.12 x | 46.14% |
0.94513 |
RIFOXYD1_FULL_Hyd...
66.67%
|
unknown
66.67%
|
Hydrogenophilales
66.67%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_01242018_0_2um_scaffold_4617
2183 bp | 58.06 x | 48.88% |
0.891892 |
GWF2_Sideroxydans...
33.33%
|
unknown
66.67%
|
Gallionellales
33.33%
|
Betaproteobacteria
66.67%
|
Proteobacteria
66.67%
|
Bacteria
66.67%
|
RTP_01242018_0_2um_scaffold_4628
2179 bp | 47.36 x | 47.73% |
0.955484 |
mine drainage met...
66.67%
|
unknown
66.67%
|
unknown
66.67%
|
unknown
66.67%
|
unknown
66.67%
|
unknown
66.67%
|
RTP_01242018_0_2um_scaffold_4638
2174 bp | 61.68 x | 49.54% |
0.981141 |
CG_Hydro_01
50.00%
|
unknown
100.00%
|
Hydrogenophilales
50.00%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_01242018_0_2um_scaffold_4781
2123 bp | 39.85 x | 51.15% |
0.910033 |
R_Methylophilales...
50.00%
|
unknown
100.00%
|
Methylophilales
100.00%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_01242018_0_2um_scaffold_4801
2118 bp | 49.43 x | 46.93% |
0.936261 |
mine drainage met...
100.00%
|
unknown
100.00%
|
unknown
100.00%
|
unknown
100.00%
|
unknown
100.00%
|
unknown
100.00%
|
RTP_01242018_0_2um_scaffold_4876
2095 bp | 60.86 x | 49.93% |
0.857757 |
mine drainage met...
100.00%
|
unknown
100.00%
|
unknown
100.00%
|
unknown
100.00%
|
unknown
100.00%
|
unknown
100.00%
|
RTP_01242018_0_2um_scaffold_5029
2038 bp | 45.63 x | 50.39% |
0.759568 |
Polaromonas sp. J...
40.00%
|
unknown
60.00%
|
unknown
60.00%
|
Betaproteobacteria
40.00%
|
Proteobacteria
60.00%
|
Bacteria
60.00%
|
RTP_01242018_0_2um_scaffold_5147
2003 bp | 60.13 x | 46.03% |
0.898652 |
Azoarcus sp. KH32C
33.33%
|
unknown
66.67%
|
Rhodocyclales
66.67%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_01242018_0_2um_scaffold_5196
1988 bp | 54.02 x | 45.37% |
0.974849 |
GWA2_Gallionellal...
50.00%
|
unknown
100.00%
|
Gallionellales
100.00%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_01242018_0_2um_scaffold_5320
1945 bp | 47.12 x | 46.12% |
0.744987 |
RIFOXYD1_FULL_Hyd...
66.67%
|
unknown
66.67%
|
Hydrogenophilales
66.67%
|
Betaproteobacteria
66.67%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_01242018_0_2um_scaffold_5327
1943 bp | 49.18 x | 45.60% |
0.952651 |
mine drainage met...
50.00%
|
Sulfuricella
50.00%
|
Sulfuricellales
50.00%
|
Betaproteobacteria
50.00%
|
Proteobacteria
50.00%
|
Bacteria
50.00%
|
RTP_01242018_0_2um_scaffold_5348
1936 bp | 42.85 x | 45.45% |
0.917355 |
Bordetella bronch...
20.00%
|
unknown
60.00%
|
unknown
40.00%
|
Betaproteobacteria
80.00%
|
Proteobacteria
80.00%
|
Bacteria
80.00%
|
RTP_01242018_0_2um_scaffold_5370
1929 bp | 69.28 x | 45.67% |
0.884914 |
CG_Beta_01
33.33%
|
unknown
100.00%
|
unknown
66.67%
|
Betaproteobacteria
66.67%
|
Proteobacteria
66.67%
|
Bacteria
66.67%
|
RTP_01242018_0_2um_scaffold_5566
1869 bp | 68.14 x | 43.29% |
0.481541 |
unknown
100.00%
|
unknown
100.00%
|
unknown
100.00%
|
unknown
100.00%
|
unknown
100.00%
|
unknown
100.00%
|
RTP_01242018_0_2um_scaffold_5598
1859 bp | 65.12 x | 45.67% |
0.907477 |
unknown
50.00%
|
unknown
50.00%
|
unknown
50.00%
|
Betaproteobacteria
50.00%
|
Proteobacteria
50.00%
|
Bacteria
50.00%
|
RTP_01242018_0_2um_scaffold_5635
1848 bp | 51.22 x | 49.35% |
1.0 |
mine drainage met...
50.00%
|
unknown
100.00%
|
unknown
100.00%
|
unknown
100.00%
|
unknown
100.00%
|
unknown
100.00%
|
RTP_01242018_0_2um_scaffold_5665
1842 bp | 55.46 x | 47.72% |
0.90228 |
Herbaspirillum sp...
33.33%
|
unknown
66.67%
|
Burkholderiales
33.33%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_01242018_0_2um_scaffold_12036
1805 bp | 60.66 x | 47.15% |
0.879224 |
mine drainage met...
33.33%
|
Methylovorus
33.33%
|
Methylophilales
33.33%
|
Betaproteobacteria
66.67%
|
Proteobacteria
66.67%
|
Bacteria
66.67%
|
RTP_01242018_0_2um_scaffold_5819
1805 bp | 43.96 x | 48.98% |
1.00055 |
mine drainage met...
33.33%
|
Pseudomonas
33.33%
|
Pseudomonadales
33.33%
|
Gammaproteobacteria
33.33%
|
Proteobacteria
66.67%
|
Bacteria
66.67%
|
RTP_01242018_0_2um_scaffold_5862
1795 bp | 40.28 x | 45.96% |
0.763788 |
Rhodocyclaceae ba...
100.00%
|
unknown
100.00%
|
Rhodocyclales
100.00%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_01242018_0_2um_scaffold_5892
1788 bp | 53.61 x | 47.04% |
0.785235 |
Cupriavidus basil...
50.00%
|
Cupriavidus
50.00%
|
Burkholderiales
50.00%
|
Betaproteobacteria
50.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_01242018_0_2um_scaffold_5939
1775 bp | 46.39 x | 51.61% |
0.988732 |
Burkholderia sp. ...
33.33%
|
Burkholderia
66.67%
|
Burkholderiales
66.67%
|
Betaproteobacteria
66.67%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_01242018_0_2um_scaffold_5952
1773 bp | 36.97 x | 49.46% |
0.998308 |
RIFOXYA1_FULL_Hyd...
100.00%
|
unknown
100.00%
|
Hydrogenophilales
100.00%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_01242018_0_2um_scaffold_5991
1768 bp | 68.21 x | 48.30% |
0.904412 |
CG_Beta_01
33.33%
|
unknown
66.67%
|
unknown
66.67%
|
Betaproteobacteria
66.67%
|
Proteobacteria
66.67%
|
Bacteria
66.67%
|
RTP_01242018_0_2um_scaffold_10824
1767 bp | 72.67 x | 44.31% |
0.75382 |
Methylotenera mob...
50.00%
|
Methylotenera
50.00%
|
Methylophilales
50.00%
|
Betaproteobacteria
50.00%
|
Proteobacteria
50.00%
|
Bacteria
100.00%
|
RTP_01242018_0_2um_scaffold_6034
1758 bp | 59.81 x | 45.85% |
0.798635 |
Sulfuricella deni...
50.00%
|
Sulfuricella
50.00%
|
Sulfuricellales
50.00%
|
Betaproteobacteria
75.00%
|
Proteobacteria
75.00%
|
Bacteria
75.00%
|
RTP_01242018_0_2um_scaffold_6097
1744 bp | 58.74 x | 49.03% |
1.00975 |
Thiobacillus deni...
50.00%
|
Thiobacillus
50.00%
|
Hydrogenophilales
50.00%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_01242018_0_2um_scaffold_6316
1699 bp | 66.30 x | 45.62% |
0.893467 |
mine drainage met...
100.00%
|
unknown
100.00%
|
unknown
100.00%
|
unknown
100.00%
|
unknown
100.00%
|
unknown
100.00%
|
RTP_01242018_0_2um_scaffold_6470
1674 bp | 53.05 x | 49.16% |
0.172043 |
unknown
66.67%
|
unknown
66.67%
|
unknown
66.67%
|
unknown
66.67%
|
unknown
66.67%
|
unknown
66.67%
|
RTP_01242018_0_2um_scaffold_6481
1672 bp | 46.92 x | 46.35% |
0.958134 |
Candidatus Accumu...
33.33%
|
Candidatus Accumu...
33.33%
|
Rhodocyclales
33.33%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_01242018_0_2um_scaffold_6683
1631 bp | 53.07 x | 44.57% |
0.463519 |
unknown
100.00%
|
unknown
100.00%
|
unknown
100.00%
|
unknown
100.00%
|
unknown
100.00%
|
unknown
100.00%
|
RTP_01242018_0_2um_scaffold_6693
1630 bp | 62.12 x | 46.01% |
0.953374 |
CG_Beta_01
50.00%
|
Sulfuricella
50.00%
|
Sulfuricellales
50.00%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_01242018_0_2um_scaffold_7108
1567 bp | 67.77 x | 47.73% |
0.85769 |
RBG_16_Betaproteo...
50.00%
|
Sulfuricella
50.00%
|
Sulfuricellales
50.00%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_01242018_0_2um_scaffold_7116
1566 bp | 43.49 x | 50.13% |
0.750958 |
Massilia sp. LC238
100.00%
|
Massilia
100.00%
|
Burkholderiales
100.00%
|
Betaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
RTP_01242018_0_2um_scaffold_7229
1553 bp | 51.09 x | 50.42% |
0.95235 |
mine drainage met...
66.67%
|
unknown
66.67%
|
unknown
66.67%
|
unknown
66.67%
|
unknown
66.67%
|
unknown
66.67%
|
RTP_01242018_0_2um_scaffold_7332
1538 bp | 50.03 x | 45.71% |
0.751625 |
Methylomicrobium ...
25.00%
|
Methylomicrobium
25.00%
|
Methylococcales
25.00%
|
Betaproteobacteria
50.00%
|
Proteobacteria
75.00%
|
Bacteria
75.00%
|