ggKbase home page

RTP_01242018_0_2um_scaffold_3994_1

Organism: RTP_01242018_0_2um_Hydrogenophilales_61_5

megabin RP 51 / 55 MC: 21 BSCG 48 / 51 MC: 17 ASCG 12 / 38 MC: 4
Location: comp(2..1318)

Top 3 Functional Annotations

Value Algorithm Source
Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain id=1320901 bin=GWE1_T_denit_62_9 species=Hahella chejuensis genus=Hahella taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb similarity UNIREF
DB: UNIREF100
  • Identity: 69.2
  • Coverage: 454.0
  • Bit_score: 573
  • Evalue 1.60e-160
diguanylate cyclase/phosphodiesterase similarity KEGG
DB: KEGG
  • Identity: 25.4
  • Coverage: 485.0
  • Bit_score: 124
  • Evalue 4.20e-26
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 80.6
  • Coverage: 443.0
  • Bit_score: 690
  • Evalue 1.30e-195

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1317
ATGGACAACCACATCGACAGCCAGCACGCCGGCCAGGAATTGCGGCGCGACAAGCGTTTTCAGGTCTCCCAGGCAGCCATCATCACGCAAGCCGGGTATCCCGACATCGCCTGCGAGATTCGGGATTTCTGCGTAGGCGGGCTTTTCCTCAAATTCACCAACCCGGAAGCGGCCATTACCGCCCTGGCCAAACGCGCCAATGCCGAAGTGGAAATCGTCTTCACCTCGGCCTCCAGCAGCAGCACGCTCAACTTTCAGGTACCTGCGCTGCTCAAGCGGCTGAGCCCGCTGGGCGTCGGCGTCTCGTTCATTCGTCCGCCGCTCGATGCGTTGCGCGCGCTGCAAAAGCTGCGCATGGCAAGCCACCGGCAAAAACTTGCCGCGCTGCCGACCTCGGAGGCTTTCCCCCATCTGCGTCAGGCCAGCACCACGCTGCTGAATGAAACCCTGCTGCATGCGCACGACCAGCTGATGCGGGTGCTGGGCGACAAGCTTGGCGCGGCCGCGACACTGGCGTCCGGCATTGCCGAACACAGCGGCTTGCTGAGCGCGATGCACGAAATCAGCCAGCAATCCGCTGCTGTGCAAACCCGCTTCGTGCAGCAGGTGATGGATGCGTTGAAGCAAGGCAACGCCGTGCAAAGCCAGGTCAAGTCAGGCACCGGCGACGGCGGCCTGGCGCTGGTGGATGAACTGGATTTTGAAGACTGGCTCGCCACCTCGACCGAAGCGCATAAGCTCGAAGAGCAGTTTCACGAGCTGCTGGCCGACACCGAACCGCGCATCGGCCAGTTGTTCGGCTTTGCCTGCGACCACAGCACCAACCCCTTCGGCCCCGGCATCATCGGCCATGCTTTCCGCAACGCGCTGCAGGATGTTCCGGTATCGGCGCGCGCGCGGCAGGTGGCCTACACGACCCTGCGCGAAGTCCTGTCCGACCAGCTGGCGCCGTTGTATTCGGAGTTGCTGGCGATGCTGCCGGTTTCGCAGGCAGAAACCCGGTTGCAGCCAACGCCCCCGGCTGCGCCGCCGTCGCCCGCTGACGCCGACCAGGCCGCCCCCGCTCGGCCCGACGCCAGCCCGACCGGCGCCGCGGCGCCCAAAGGCGCGCTCAGCCGCCTGACGAGTTCCCTGATGGATTTTTTCCAGGGGAATCAGGGCCAGGCTGCAGCGGTCGCGCCCGCCGCGGCAAACGCTCAGGCACCCCAGGGCGGCCAGGGCGGTCATGCGCAACCCGCGGCAGCGGGCGGGCAGGCGATGCCGGCGGGAGGCACCGGTGTGGCGCATTCGCCGGTGTTGCAACGTCTGGCCGCAGCC
PROTEIN sequence
Length: 439
MDNHIDSQHAGQELRRDKRFQVSQAAIITQAGYPDIACEIRDFCVGGLFLKFTNPEAAITALAKRANAEVEIVFTSASSSSTLNFQVPALLKRLSPLGVGVSFIRPPLDALRALQKLRMASHRQKLAALPTSEAFPHLRQASTTLLNETLLHAHDQLMRVLGDKLGAAATLASGIAEHSGLLSAMHEISQQSAAVQTRFVQQVMDALKQGNAVQSQVKSGTGDGGLALVDELDFEDWLATSTEAHKLEEQFHELLADTEPRIGQLFGFACDHSTNPFGPGIIGHAFRNALQDVPVSARARQVAYTTLREVLSDQLAPLYSELLAMLPVSQAETRLQPTPPAAPPSPADADQAAPARPDASPTGAAAPKGALSRLTSSLMDFFQGNQGQAAAVAPAAANAQAPQGGQGGHAQPAAAGGQAMPAGGTGVAHSPVLQRLAAA