ggKbase home page

RTP_01242018_0_2um_scaffold_5223_1

Organism: RTP_01242018_0_2um_Hydrogenophilales_61_5

megabin RP 51 / 55 MC: 21 BSCG 48 / 51 MC: 17 ASCG 12 / 38 MC: 4
Location: comp(2..1519)

Top 3 Functional Annotations

Value Algorithm Source
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Z5J8_9RHOO similarity UNIREF
DB: UNIREF100
  • Identity: 86.0
  • Coverage: 506.0
  • Bit_score: 846
  • Evalue 1.10e-242
transporter, hydrophobe/amphiphile efflux-1 (HAE1) family similarity KEGG
DB: KEGG
  • Identity: 83.4
  • Coverage: 506.0
  • Bit_score: 830
  • Evalue 2.40e-238
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 96.6
  • Coverage: 506.0
  • Bit_score: 938
  • Evalue 2.30e-270

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1518
ATGGCTAATTTCTTCATCGACCGGCCCATCTTCGCGTGGGTTATCGCCCTCGTCATCATGCTGGCGGGAGCGCTGTCCATCCTCGGCCTGCCGATTTCGCAATATCCCGCCATCGCGCCGCCGGCCATCGCCATCAACGCCAGCTATCCCGGCGCGTCGGCCAAATCGGTGGAAGACTCGGTGACCCAGGTCATCGAGCAAAAGATGACCGGCCTCGACGGCCTGCTCTACATGAATTCGTCGAGCGATGCCAACGGCCGTGCCACGGTGACGCTTACCTTCAGCGCTGACACCGATCCCGATATCGCCCAGGTGCAGGTGCAGAACAAGCTGCAGACCGCGTTGCCCTTGTTGCCGCAGGCGGTGCAGCAGCAAGGCGTGCAGGTGGCCAAATCGGCGCGCAATTTCCTCATGGTGCTGGGCTTTGCCTCGACCGACGGCAAGCTGAACGCAAACGACCTGTCGGACTTTGTGGTGTCCAACCTGCAGGATCCGCTGTCGCGCGTGACCGGCGTCGGCGAACTGCAGGTGTTCGGCTCGCAGTACGCCATGCGGGTTTGGCTTGATCCGGCCAGGCTGAACAGCTTCAATCTCACGCCCGCCGACGTCAAGGCCGCGATCCAGGCGCAGAACACGCAGGTGTCGGCCGGCCAGCTTGGGGGTACGCCGTCGGTGCCCGGCCAGGGCTTCAGTGCGACGATCACCGCGCAGAGCCGGCTGCAAAACGCGCAACAGTTCAATGCCATTTTGCTGCGTACGTCAGCGCAGGGCGGCGAAGTGCGCCTGGGCGATGTGGCCCGGGTCGAGATCGGCGCCGAAAACTACGGCACGATGGCGCGCTTCAACGGTGAGCCCGCTGCCGGGGTCGGCATCAAGCTCGCCGCCGGTGCCAACGCGCTGGAAACGGCCGATGCGGTGCGCGCCAAGCTCGCCGAGCTGCAGCCCTATTTCCCGGCCGGAGTCGAGGCCGTGGTGCCCTACGACACCACGCCCTTCGTCCGCATCTCGATCAAGTCGGTGGTCATGACGCTGGTCGAGGCGGTCGCGCTGGTGTTTCTGGTGATGTTCCTGTTCCTGCAGAACCTGCGCGCCACGCTGATTCCCACCATCGCGATTCCCGTGGTGCTGCTCGGCACTTTCGGAGTGATGGCGGCGTTCGGCTTCACGATCAACACGCTGACGATGTTCGGCATCGTGCTGGCGATCGGCCTGCTGGTGGACGACGCCATCGTGGTGGTTGAAAACGTCGAGCGCGTGATGACCGAGGAAGGCCTGTCGCCGAAGGAGGCGACCAAGAAGTCGATGCGCCAGATCACCGGCGCGCTGGTCGGTATCGGCCTGGTGCTGTCGGCGGTGTTCGTTCCGATGGCGTTCTTCGGCGGCTCTACCGGCGTGATCTATCGCCAGTTCTCGATCACCATCGTCGCTGCCATGGCCTTGTCGGTGCTGGTGGCGATCGTGTTCACCCCGGCGCTGTGCGCGACGATGCTGAAGCCAATTGAAAAAGGCCACAGCCAC
PROTEIN sequence
Length: 506
MANFFIDRPIFAWVIALVIMLAGALSILGLPISQYPAIAPPAIAINASYPGASAKSVEDSVTQVIEQKMTGLDGLLYMNSSSDANGRATVTLTFSADTDPDIAQVQVQNKLQTALPLLPQAVQQQGVQVAKSARNFLMVLGFASTDGKLNANDLSDFVVSNLQDPLSRVTGVGELQVFGSQYAMRVWLDPARLNSFNLTPADVKAAIQAQNTQVSAGQLGGTPSVPGQGFSATITAQSRLQNAQQFNAILLRTSAQGGEVRLGDVARVEIGAENYGTMARFNGEPAAGVGIKLAAGANALETADAVRAKLAELQPYFPAGVEAVVPYDTTPFVRISIKSVVMTLVEAVALVFLVMFLFLQNLRATLIPTIAIPVVLLGTFGVMAAFGFTINTLTMFGIVLAIGLLVDDAIVVVENVERVMTEEGLSPKEATKKSMRQITGALVGIGLVLSAVFVPMAFFGGSTGVIYRQFSITIVAAMALSVLVAIVFTPALCATMLKPIEKGHSH