ggKbase home page

RTP_01242018_0_2um_scaffold_12400_2

Organism: RTP_01242018_0_2um_Hydrogenophilales_61_5

megabin RP 51 / 55 MC: 21 BSCG 48 / 51 MC: 17 ASCG 12 / 38 MC: 4
Location: 635..1114

Top 3 Functional Annotations

Value Algorithm Source
histone deacetylase family protein id=12496990 bin=THIO_MID species=unknown genus=unknown taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 75.0
  • Coverage: 160.0
  • Bit_score: 256
  • Evalue 1.20e-65
Histone deacetylase similarity KEGG
DB: KEGG
  • Identity: 54.4
  • Coverage: 158.0
  • Bit_score: 176
  • Evalue 3.40e-42
Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 57.0
  • Coverage: 158.0
  • Bit_score: 186
  • Evalue 2.10e-44

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Betaproteobacteria_61_14 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 480
ATGCCACGCGTCGCTTACCTGACGCATCCCGATTGTCCGCGCCACGATGTTGGGCCGTGGCACCCCGAATCGCCCAAGCGCTGGCAGGCCGTGGATGAAGCCCTGCGCGGCGCATCCTGGTTCGGTCAATTGCTGCAGATTACCCCGCCGCACGCCACCCTTGAACAACTGCAGCGCGCCCATGCCATCACCCATGTTGATTCCGTGCGCAACGCCATTCCGGACAAGGGTGTCGCATGGCTCGATCCCGATACCGGCGTCACCCCCTTCAGCTGGGATGCCGCACTGGCGGCAGCTGGCGCAGTGGTGCGCGCAGTTGACGCGCTGATGGCAGGCGAAGCGAACCGCGCTTTCTGCAATGTCCGCCCACCGGGCCATCACGCCGAAGCCGATCGGGCAATGGGATTCTGCCTGTTCAACAACGTCGCGGTGGGTGTATTGCATGCCCTGCATGCCCACGCGCTGAAGCGGGTCGCGCTG
PROTEIN sequence
Length: 160
MPRVAYLTHPDCPRHDVGPWHPESPKRWQAVDEALRGASWFGQLLQITPPHATLEQLQRAHAITHVDSVRNAIPDKGVAWLDPDTGVTPFSWDAALAAAGAVVRAVDALMAGEANRAFCNVRPPGHHAEADRAMGFCLFNNVAVGVLHALHAHALKRVAL