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RTP_02272018_0_2um_scaffold_524_12

Organism: RTP_02272018_0_2um_Hydrogenophilales_59_385

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: comp(13306..13884)

Top 3 Functional Annotations

Value Algorithm Source
type IV pilus assembly protein PilN; K02663 type IV pilus assembly protein PilN id=12493055 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 85.4
  • Coverage: 192.0
  • Bit_score: 321
  • Evalue 4.80e-85
type IV pilus assembly protein PilN similarity KEGG
DB: KEGG
  • Identity: 83.9
  • Coverage: 192.0
  • Bit_score: 310
  • Evalue 2.40e-82
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 83.9
  • Coverage: 192.0
  • Bit_score: 312
  • Evalue 2.40e-82

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Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 579
ATGATTCGGATTAACCTTCTCCCTCACCGAGAACTTGCGCGCGCGGCTCGGCGGCGCCAGTTCAACATTCTCCTTGGCATGGCTGTCGCCGCGGGTGTAGTGGTTGTTCTGCTCGGACACAGTTACATCGCCGCGAGCCAGTCGACGCAGGATGCGCGGAATGCATTCCTTGATCAGGAAATCGCCAAACTCGACATCCAGATCGGCGAAATCAAGAAAATACGCGAACAAACTCAGGCGTTACTGGCGCGTAAACAAGTTGTTGAAACCTTGCAATCCAATCGCACTGAAGTGGTGCATTTGTTTGACCAGATGATACGGCTGCTGCCCGAGGGTTTGTACCTTAAATCCTTCAGTCAAGCGGGAAATGTGGTTACGCTTAGCGGCTATACCCAATCGAGCGCGCGCGTTTCCACGCTGATGCGGAATCTGGAGAACTCTCCCTGGTTTGAGTCGGTCAGCTTGATCGAAATCAAGGCGGCAACCGTCAACAATTTGCGTGCCAACGAGTTTGTCCTGACGGTTAAACAAACACCCCAACAAACCACAGATACGCAGAACAAGGGGGGCAAAGCATGA
PROTEIN sequence
Length: 193
MIRINLLPHRELARAARRRQFNILLGMAVAAGVVVVLLGHSYIAASQSTQDARNAFLDQEIAKLDIQIGEIKKIREQTQALLARKQVVETLQSNRTEVVHLFDQMIRLLPEGLYLKSFSQAGNVVTLSGYTQSSARVSTLMRNLENSPWFESVSLIEIKAATVNNLRANEFVLTVKQTPQQTTDTQNKGGKA*