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RTP_02272018_0_2um_scaffold_118_11

Organism: RTP_02272018_0_2um_Hydrogenophilales_62_27

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: 9192..9737

Top 3 Functional Annotations

Value Algorithm Source
rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13) similarity KEGG
DB: KEGG
  • Identity: 78.5
  • Coverage: 181.0
  • Bit_score: 312
  • Evalue 7.70e-83
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:CAD84589.1}; EC=5.1.3.13 {ECO:0000313|EMBL:CAD84589.1};; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.5
  • Coverage: 181.0
  • Bit_score: 312
  • Evalue 3.80e-82
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Pseudomonas tolaasii RepID=UPI00036734E0 similarity UNIREF
DB: UNIREF100
  • Identity: 81.8
  • Coverage: 181.0
  • Bit_score: 316
  • Evalue 1.10e-83

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Taxonomy

Nitrosomonas europaea → Nitrosomonas → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 546
TTGAAAGCCACGCCGCTCGCCATCCCCGACGTAATCCTGCTCGAACCCAAGGTGTTCGGCGACGACCGGGGCTTCTTCTTCGAAAGCTTCAACCAGTCGCAGTTCGAGGCCGCCATCGGCCGGCAAGTCGCTTTCGTGCAGGACAACCATTCGCGCTCGGCCAAAAACGTGCTGCGCGGCCTGCACTATCAAATCCGCCAGCCGCAGGGCAAGCTGGTGCGCGTCGTCCAGGGCGAGGTGTTCGATGTGGCGGTCGATATCCGCCAATCTTCACCCACCTTCGGCCAATGGGTGGGTGAAATACTGTCGGCCGAAAACAAACGGCAGATGTGGGTGCCGGCAGGCTTCGCGCACGGCTTCGTCGTGCTGTCGGACACGGCCGAATTTCTCTACAAAACCACCGACTACTATGCGCCGGAACACGAGCGTTGCATCGCCTGGGACGACCCGGCCATCGGCATCCAGTGGCCGCTCGACGGCGCACCCGCACTCTCCGCCAAGGACCGGCAAGGCAAACCGCTCGCCGAAGCGGAGCGCTTTGCATGA
PROTEIN sequence
Length: 182
LKATPLAIPDVILLEPKVFGDDRGFFFESFNQSQFEAAIGRQVAFVQDNHSRSAKNVLRGLHYQIRQPQGKLVRVVQGEVFDVAVDIRQSSPTFGQWVGEILSAENKRQMWVPAGFAHGFVVLSDTAEFLYKTTDYYAPEHERCIAWDDPAIGIQWPLDGAPALSAKDRQGKPLAEAERFA*