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RTP_02272018_0_2um_scaffold_458_53

Organism: RTP_02272018_0_2um_Hydrogenophilales_62_27

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: 52332..54083

Top 3 Functional Annotations

Value Algorithm Source
Lipid A export ATP-binding/permease protein MsbA {ECO:0000255|HAMAP-Rule:MF_01703}; EC=3.6.3.- {ECO:0000255|HAMAP-Rule:MF_01703};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.1
  • Coverage: 573.0
  • Bit_score: 984
  • Evalue 5.60e-284
ATP-binding protein n=1 Tax=Thiobacillus thioparus RepID=UPI00038012FC similarity UNIREF
DB: UNIREF100
  • Identity: 90.7
  • Coverage: 582.0
  • Bit_score: 1037
  • Evalue 0.0
lipid A export ATP-binding/permease MsbA similarity KEGG
DB: KEGG
  • Identity: 87.1
  • Coverage: 573.0
  • Bit_score: 984
  • Evalue 1.10e-284

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1752
ATGCCTGAGCCTTCTGAATGGCAGAAGAGCCGCGCGCTGTACCTGCGCCTGCTCGGCTATGTGAAGCCCTACTGGCGCATGTTCGCGATCTCCCTCGTCGCGCTGATTCTGACTGCTGCCACCGAACCGATGTTGCCGGCGCTGTTCAAGCCGCTGCTGGACGAGGGCTTTGTGGCCAAGGATCAGGACTTCATCCGCTGGATTCCGATTCTGCTGCTGGCGCTGTTTCTGGTGCGCGGCGTCACCAGTTTCATCAGCACCTACTGCATGGCCTGGGTGGGCAGCCGCCTGGTGATGGACTTGCGCGCCGCCATGTTCGACAAGCTGATGACGCTGCCGACGCGTTACTTCGACCAGAACCCGAGCGGCCAGCTGATCGCGCATCTGGCGTTCAACGTCACCCAGGTCACGCAGTCGGCCACCAGTTCGCTCACCACGCTGGTGCGCGACACGGTGACGGTGCTGGGGCTGCTCGGCTATCTGCTGTGGCTGAACTGGCAGCTGACCCTGATCGTTTTCGCGATGGTGCCGCTCACGCTGTGGATCGTGCGCGTGGCCAGCACGCGCCTACGCGGCCTGTCGCGCAAGGCGCAGCAGAACATCGGCGACCTCACCCAGGTGGTCGACGAGGCAGTGGGCGGACATCGCGTGGTCAAGCTCTATGGCGGCGAGGAATACGAACAGACGCGCTTCCGCCAGGCCGCCAATCTGGCACGGGTGTTCGAGATGAAGCGCGTCGCGGCCAACGCGGTGTACGAGCCGGTGATCCAGTTGATCGCCGCGATCGCGCTCGCGATCATCGTCCACATCGCGGTCGGGCAGGCGACCGGCAATGCCATGACGGTCGGCGGCTTTGTCGCCTTTTTCATGGCCATGCTGCTGCTGTTCGCGCCGCTCAAACGGCTCACCGCCGTCAACGACCAGTTGCAGCGCGGGCTCGCCGCGGCCGAAACCATCTTCGCCATGCTCGATCAGGACGCCGAGCGCGACAGCGGGACGCGCACGCTCGACCGCATCGAGGGTCGGCTCACGTTCCGCGATGTGGCGCTGACCTATCCGGGGAAAACCGTTCCGGCGCTGGCCGACATCACGCTCGACATCGCACCCGGCGAAACCGTGGCGCTGGTCGGAGCGTCGGGTTCGGGCAAGACCACGCTGGCCAATCTGATGCCGCGTTTTTACGATCCCGATTCCGGTTTAATCGAACTCGACGGCATCGACATCCGCGACATCCGCCTGCAGAACCTGCGCAACCACATCGCGCTGGTGTCGCAGGACGTGGTGCTGTTCAACGACACGCTGGGCCACAACATCGCCTACGGCAGCAAGCGCGACGCAACCGCCGACGAGATCCGCGCCGCCTGCATCGCGGCCCATGCCTGGGATTTCATCCAGGCCATGCCCGACGGCCTGGAGACGCTGGTCGGCGAAAACGGCATGCGGCTTTCCGGCGGCCAGCGCCAGCGCATCGCCATCGCGCGCGCGATCCTGAAAAACGCCCCCATCCTGATTCTCGACGAAGCCACCTCGGCTCTGGACAACGAATCCGAGCGCCATGTGCAGGCCGCGATTGACGCGCTGGTAGCCAACCGCACCACGCTGGTTGTCGCGCATCGCCTCTCCACCATCGAGCGCGCAAGCCGCATCGTGGTGCTAGAAGGCGGGCGCATCATCGAGATCGGCAGCCACGCCGACCTGATCGCCAGACAGGGCCGCTACGCGCAGCTGCACGCGTTGCAGTTTTCCGCATGA
PROTEIN sequence
Length: 584
MPEPSEWQKSRALYLRLLGYVKPYWRMFAISLVALILTAATEPMLPALFKPLLDEGFVAKDQDFIRWIPILLLALFLVRGVTSFISTYCMAWVGSRLVMDLRAAMFDKLMTLPTRYFDQNPSGQLIAHLAFNVTQVTQSATSSLTTLVRDTVTVLGLLGYLLWLNWQLTLIVFAMVPLTLWIVRVASTRLRGLSRKAQQNIGDLTQVVDEAVGGHRVVKLYGGEEYEQTRFRQAANLARVFEMKRVAANAVYEPVIQLIAAIALAIIVHIAVGQATGNAMTVGGFVAFFMAMLLLFAPLKRLTAVNDQLQRGLAAAETIFAMLDQDAERDSGTRTLDRIEGRLTFRDVALTYPGKTVPALADITLDIAPGETVALVGASGSGKTTLANLMPRFYDPDSGLIELDGIDIRDIRLQNLRNHIALVSQDVVLFNDTLGHNIAYGSKRDATADEIRAACIAAHAWDFIQAMPDGLETLVGENGMRLSGGQRQRIAIARAILKNAPILILDEATSALDNESERHVQAAIDALVANRTTLVVAHRLSTIERASRIVVLEGGRIIEIGSHADLIARQGRYAQLHALQFSA*