ggKbase home page

RTP_02272018_0_2um_scaffold_410_3

Organism: RTP_02272018_0_2um_Hydrogenophilales_62_27

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: 1208..1939

Top 3 Functional Annotations

Value Algorithm Source
competence protein ComL n=1 Tax=Thiobacillus denitrificans RepID=UPI00036757FD similarity UNIREF
DB: UNIREF100
  • Identity: 92.2
  • Coverage: 243.0
  • Bit_score: 462
  • Evalue 1.70e-127
competence lipoprotein similarity KEGG
DB: KEGG
  • Identity: 87.7
  • Coverage: 243.0
  • Bit_score: 437
  • Evalue 1.60e-120
Outer membrane protein assembly factor BamD {ECO:0000256|HAMAP-Rule:MF_00922}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.7
  • Coverage: 243.0
  • Bit_score: 437
  • Evalue 8.10e-120

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 732
TTGCCCGAGGTCAAGGATGAAACCGCGGGCTGGTCGGCACAAAAGCTCTACGCCGAGGCCAAGGATAATCTGAATAGCGGCAATTACGAACGCGCCGTCAAATTATTCGAGACGCTGGAATCGCGTTATCCGTTCGGTCGCTACGCGCAGCAGGCGCAGCTGGAAGTCGCTTACGCCTACTACAAGGACAATGAACCGATTTCCGCCATTGCCGCGGCCGACCGCTTCATCAAGCTCCACCCCAACCATCCTAACGTCGATTACGCCTATTACCTGAAGGGCCTGGCGAATTTTAACGACGACCTTGGCTACCTGGGCAAGATTGTCGATCAGGACCTGAGCGAGCGCGACCCCAGGGCCGCGCGGGAGGCTTTTCTGGCGTTCAAGGAAGTGGCTACCCGCTTCCCCGACGGAAAATACGCCGCCGACTCGACCGCACGCATGAAATACCTGGTCAATGCGCTGGCCAGCAACGAAGTGCATGTGGCCAAGTATTACCTGAAGCGCGGCGCCTGGGTGGCTGCCGCCAACCGCGCCAAGGAAGTGCTGAAAACCTACCCCGAAGCGCCCGCGCTGGAAGAGGCGCTGGCTATCATGGTGGTGTCCTACGACAAGCTGAAACTCACCGACCTGCGCGACGATGCGCAGCGGGTGTTGAAACTCAACTTCCCCAACAGCAAGTACGCCAAAGGCGTCAGCACCGAGGGCAAGGCCTGGTACCGGTTCTGGTAA
PROTEIN sequence
Length: 244
LPEVKDETAGWSAQKLYAEAKDNLNSGNYERAVKLFETLESRYPFGRYAQQAQLEVAYAYYKDNEPISAIAAADRFIKLHPNHPNVDYAYYLKGLANFNDDLGYLGKIVDQDLSERDPRAAREAFLAFKEVATRFPDGKYAADSTARMKYLVNALASNEVHVAKYYLKRGAWVAAANRAKEVLKTYPEAPALEEALAIMVVSYDKLKLTDLRDDAQRVLKLNFPNSKYAKGVSTEGKAWYRFW*