ggKbase home page

RTP_02272018_0_2um_scaffold_479_28

Organism: RTP_02272018_0_2um_Hydrogenophilales_62_27

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: comp(26377..28008)

Top 3 Functional Annotations

Value Algorithm Source
Peptide chain release factor 3 id=1332591 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb similarity UNIREF
DB: UNIREF100
  • Identity: 93.2
  • Coverage: 543.0
  • Bit_score: 1022
  • Evalue 1.20e-295
prfC; peptide chain release factor 3 similarity KEGG
DB: KEGG
  • Identity: 91.3
  • Coverage: 542.0
  • Bit_score: 999
  • Evalue 3.20e-289
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 94.1
  • Coverage: 542.0
  • Bit_score: 1029
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1632
ATGGAATCCACTCTCACCGCGCCGGCGCAAACCGGCGATCCGGCCTTGGCGCGCGACGTCAAAAAACGCCGCACCTTCGCCATCATCTCGCACCCCGATGCGGGTAAAACCACGCTGACCGAAAAGCTGCTGCTGTTCGGCGGCGCGATCCAGATGGCCGGGACGGTCAAGGCACGCAAAAGCGGGCGTTACGCCACCTCCGACTGGATGGAAGTCGAACGCGAGCGCGGCATTTCAGTGGCGAGCTCGGTCATGCAGTTCTCTCATGGCGACTGCGTGTTCAACCTGCTCGACACCCCCGGCCACAAGGACTTTTCCGAAGACACCTACCGCGTGCTGACCGCGGTGGACGCCGCGATCATGGTGGTCGATGCCGCCAAGGGCGTGGAAGAGCAGACCATCAAGCTGCTGGAAGTGTGTCGCCTGCGCGACACCCCCATCATCACCTTCATCAACAAGATGGACCGCGAGGTGCGCGAGCCCCTGGAACTGCTCGACGAGATCGAGTCGATCCTGAAAATCCACTGCGCGCCGGTGACCTGGCCGATCGGCATGGGCAAGCGTTTTCAGGGCGTGTACCACCTGCTCAACAATGAAATCCTGCGCTTCAAGGCGGGGGAAGAGAACGCCAGCCAGCAGTTCGAGTCGCTGCAGGGCCTGGGCGAAGCTGCGCTGAAGGAGCGTTTCCCGCTCGAAGCCGACACCCTGCTGTCCGAAATCGAACTGGTGCGCGGCGCCGGCGACAGCTTCGATCTCGATGCGTTTCTCAAGGGCAGGCAGTCGCCGGTGTTTTTCGGTTCCGGGATCAACAACTTCGGCGTGCGCGAAGTGCTGCGCGCGCTGGCAGACTGGGCGCCGCCGCCGCAGCCGCGCGAGGCGGTCGAGCGCACGGTCGATCCCACCGAGCCCAAGTTCACCGGCTTCGTGTTCAAGATCCAGGCCAACATGGACCCGCAGCACCGCGACCGCATCGCCTTCTTCCGCGTCTGCTCCGGCCGTTATAGCCCCAACATGAAAGTGCGCCACCGCCGCACCGGCAAGGACATGAAAATCGCCAACGCCGTCGTCTTCATGGCCAACGAGCGCACCCGTATGGAAGACGCGGTGGCGGGCGACATCATCGGCATCCACAACCACGGCCAGCTGCATATCGGCGACACCCTCACCGAAGGCGAGGCCCTGCAATACAAGGGCATCCCCTACTTCGCCCCCGAACTGTTCAGCCGCCCGCGCCTGCGCGACCCGCTGCGCGCCAAGCAGCTGAACAAGGGCCTGCTGGAGTTGGGCGAGGAAGGCGCAGTGCAGGTATTCGAGCCGTTCACCGACAACACCCTGCTGATCGGCGCGGTCGGACAGTTGCAGTTCGAAGTCGTCGCCCACCGCCTGAAAACCGAATACGGCGTCGACGCCAGCTTCGAGAACGCCGGCATCTACACCGCGCGCTGGGTCACCTGCCCCGACGCCCAGCACCTCGCCGAATTCACCAAGGCCAACACGCTCAAGCTGGCGAAGGACGTCGACGGCAATCTGGTGTATCTGGCCGATACCCGCGTAAACCTGATGCTGGCTCAGGAGCGCTGGCCCAAGGTCGCGTTCCACGACACGCGGGAGCACGGGCAGGTGATGGGGTAA
PROTEIN sequence
Length: 544
MESTLTAPAQTGDPALARDVKKRRTFAIISHPDAGKTTLTEKLLLFGGAIQMAGTVKARKSGRYATSDWMEVERERGISVASSVMQFSHGDCVFNLLDTPGHKDFSEDTYRVLTAVDAAIMVVDAAKGVEEQTIKLLEVCRLRDTPIITFINKMDREVREPLELLDEIESILKIHCAPVTWPIGMGKRFQGVYHLLNNEILRFKAGEENASQQFESLQGLGEAALKERFPLEADTLLSEIELVRGAGDSFDLDAFLKGRQSPVFFGSGINNFGVREVLRALADWAPPPQPREAVERTVDPTEPKFTGFVFKIQANMDPQHRDRIAFFRVCSGRYSPNMKVRHRRTGKDMKIANAVVFMANERTRMEDAVAGDIIGIHNHGQLHIGDTLTEGEALQYKGIPYFAPELFSRPRLRDPLRAKQLNKGLLELGEEGAVQVFEPFTDNTLLIGAVGQLQFEVVAHRLKTEYGVDASFENAGIYTARWVTCPDAQHLAEFTKANTLKLAKDVDGNLVYLADTRVNLMLAQERWPKVAFHDTREHGQVMG*