ggKbase home page

RTP_03222018_0_1um_scaffold_425_5

Organism: RTP_03222018_0_1um_Hydrogenophilales_59_110

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(4089..5006)

Top 3 Functional Annotations

Value Algorithm Source
CobD/CbiB family protein (EC:6.3.1.10) similarity KEGG
DB: KEGG
  • Identity: 76.1
  • Coverage: 305.0
  • Bit_score: 484
  • Evalue 1.90e-134
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000368B46C similarity UNIREF
DB: UNIREF100
  • Identity: 77.7
  • Coverage: 305.0
  • Bit_score: 497
  • Evalue 5.90e-138
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.1
  • Coverage: 305.0
  • Bit_score: 484
  • Evalue 9.50e-134

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 918
ATGGCTTTCTTCTCCGTTCTCGCTGCCGTTGCCCTCGAACACCTGCGTCCGCTGCGGCGCAGGTTGCCGCATTACCAGCTATACACTCGTTTTATTTTGTGGCTGGACCGGCGCTTGAATGCGGGTGAATACAGCCATGGCGCCATCGCCTGGGCGCTGGCTGTGTTGCCGGTGTTGCTGGGCGTGTGGCTGATTTTTTCTTTGCTCAGCGGCATCCATCCTGTTCTTGGCTGGGGCTGGAATGTGGTGGTGTTGTACTTCACCATGGGCTTCAAATACTTCAGCGATACGGCCGAACAGATAGCGCGGTTGTTGCGCGCGGGCGATCTCGACGGCGCACGTGCGCTTCTGGTTGACTGGCGTGGTGACGATGCCAGTGAGTTCAGCGAGGATGACATCACGCGCGTCACGATCGAACAGACGATGACATCGAGCCACCGGCAAATGTTTGGCGTGCTGTTCTGGTTTGTGTTGCTGATTCCGCTCGGTCCCGTTGGTGCGGTGTTGTTTCGTTGCGCTTCGATTTTGTCGCGACGTTGGGTGGACTCGCAGGGACGGTTCGGCTTATGCGCACAGCGTGTTTTTCATGCCATCAATTGGTTGCCCGCGCGGCTGACTGCTTTGACCTATGCCATCGCCGGCAACTTTGAGGATGCGACTTTTTGTTGGCGTACCCAGGCGCCAACCTGGCCAGAAACAGAAGATGGCGTTGTGCTCGCCGCTGGTGCGGGCGCCATGGGCTTGCAGTTAGGTCAGAGTGTCAAGATTGGCAGTGAAACCGTATGGCGGCCTGAGCTCGGCACGGGTCAGGCCCCCGAGGTCGATGGCATCGACAGCGCCGTGAACATGATCTGGCGCGGTCTGGTGATCTGGCTGGTGGCGGGTTTGCTGGTCGTTATCGCGGGTTGGGTGGCGTAA
PROTEIN sequence
Length: 306
MAFFSVLAAVALEHLRPLRRRLPHYQLYTRFILWLDRRLNAGEYSHGAIAWALAVLPVLLGVWLIFSLLSGIHPVLGWGWNVVVLYFTMGFKYFSDTAEQIARLLRAGDLDGARALLVDWRGDDASEFSEDDITRVTIEQTMTSSHRQMFGVLFWFVLLIPLGPVGAVLFRCASILSRRWVDSQGRFGLCAQRVFHAINWLPARLTALTYAIAGNFEDATFCWRTQAPTWPETEDGVVLAAGAGAMGLQLGQSVKIGSETVWRPELGTGQAPEVDGIDSAVNMIWRGLVIWLVAGLLVVIAGWVA*