ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

RTP_03222018_0_1um_scaffold_659_20

Organism: RTP_03222018_0_1um_Hydrogenophilales_59_110

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 20291..20905

Top 3 Functional Annotations

Value Algorithm Source
Cytochrome c biogenesis protein, transmembrane region id=1311324 bin=GWE1_T_denit_62_9 species=Acidithiobacillus caldus genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb similarity UNIREF
DB: UNIREF100
  • Identity: 64.5
  • Coverage: 203.0
  • Bit_score: 251
  • Evalue 6.40e-64
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 43.5
  • Coverage: 207.0
  • Bit_score: 139
  • Evalue 5.90e-31
Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 64.5
  • Coverage: 203.0
  • Bit_score: 251
  • Evalue 9.00e-64

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 615
ATGGAAACGGTCTTGCTGATTGCCGCCTTCGTGCTGGGCGTGTTGTCGTTTTTTGAGCCCTGCACCATCGCCACCCACACCCTGTTTGCGGTGCGCGCGCACCACGAACCGCTGAACTTGCGCGCGCTTGCACTGGCCCAGTTGATGTTCTCGCGGATCGGGTTGCTGTCGCTGATATTCGGGGTGGCCGCAGCAATCGGTCTGGCTGCGCTGTCCGCGCAGGCGGCGATGCTGATGCTCGGCGTGATTGGCCTCGTCTATCTGGTCACCCGCAAGGTTTATCTGCCGGTGCCGCATCTCGAGTTTTTTCGGCTCATTCCCCGCCATGCGGGGTTGTCGCAGGGATTGAAACTCGGCCTGACTTTGCCCGCCTGCACCCTGCCGCTGGTGCTGATCGTCGGCATGCTGTCCGCTTTGACGCAGCAGCCGGCGGTTGCTGTGCTGGCGGGATGCATCTTCGCCGTCATGTTCACCCTGCCCACCTTGTGGGGCAGTGTCCACGGCCTGGGTGCGGATGCGCGGGCGTTTCTCGGAAAATCCGCTTCATTCAGTCCCTACTTCACCACCGCCTTGTTGTGGGGCGCGGCTTTTCTCATTGGGCAAACCGGTTATTGA
PROTEIN sequence
Length: 205
METVLLIAAFVLGVLSFFEPCTIATHTLFAVRAHHEPLNLRALALAQLMFSRIGLLSLIFGVAAAIGLAALSAQAAMLMLGVIGLVYLVTRKVYLPVPHLEFFRLIPRHAGLSQGLKLGLTLPACTLPLVLIVGMLSALTQQPAVAVLAGCIFAVMFTLPTLWGSVHGLGADARAFLGKSASFSPYFTTALLWGAAFLIGQTGY*