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RTP_03222018_0_2um_scaffold_4393_2

Organism: RTP_03222018_0_2um_Betaproteobacteria_48_16

partial RP 38 / 55 BSCG 40 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 638..1492

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0003002387 similarity UNIREF
DB: UNIREF100
  • Identity: 62.5
  • Coverage: 293.0
  • Bit_score: 367
  • Evalue 8.60e-99
Flagellar rod assembly protein FlgJ {ECO:0000313|EMBL:KIF82156.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.4
  • Coverage: 295.0
  • Bit_score: 368
  • Evalue 7.10e-99
mannosyl-glycoprotein endo-beta-N-acetylglucosamidase similarity KEGG
DB: KEGG
  • Identity: 59.3
  • Coverage: 295.0
  • Bit_score: 342
  • Evalue 8.40e-92

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Taxonomy

Herbaspirillum sp. TSA66 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 855
ATGATTAACTCTATGGATATGACAAGTAAATTCGCCGCTGATACGCAAGGTTTGGCAGAATTAAAACGCGCGGCCAGGGAGAACTCTCCTGAGGCTATCAAGGCCGTCGCCAAACAGTTTGAAGCCGTGTTCATGAACATGATGCTCAAAAGCATGCGCCAAGCCACACCGCAAGATGGCATGCTGGATAATGACCAAAGTCGTTTATACACGTCGATGCTAGACCAGCAATTGAGCCAGAACATGGCGAATAAAGGCTTGGGTCTGGCAGATGTATTGGCACGGCAGTTATCTCAGTTCAGCCCGCCAGTTATGCCGTTAGCGATAGCTGTGCAAGTGCCGGTGCAGGCTGCCCCATTGACTGAAGTTGCACCCAAATCCAGCAACACGCAACAACCCGCTCATGTACAAGCATTCCAAAGTCGTTTACAAGCGCATGCAGACGAAGCCAGTCGCAGTACAGGCATACCTGCGAAATTTATGCTCGGGCAGGCAGCTTTGGAAAGTGGCTGGGGGCGTAAGGAAATCATGCAAGCCAATGGCACGACCAGCCATAATTTATTTGGTATTAAAGCCAGCTCAGGCTGGCACGGCAAGACCGTGGATGCAGTCACCACAGAGTATATCGATGGCGTGGCACAACGCCGCATAGAAAAATTCAGAGCATATGATAGCTATGCTGATTCATTCCGTGATTATGCACACCTGCTTAAAAGTAATCCACGTTATCAGTCAGTGATTGCGAATTCGCAAGATGCTGTTGGTTTTGCACAAGGTTTACAGCGCGCCGGATACGCGACCGACCCACACTACGCAACTAAGCTAAAACAAATCATTAATACTTCATTAGCTTGA
PROTEIN sequence
Length: 285
MINSMDMTSKFAADTQGLAELKRAARENSPEAIKAVAKQFEAVFMNMMLKSMRQATPQDGMLDNDQSRLYTSMLDQQLSQNMANKGLGLADVLARQLSQFSPPVMPLAIAVQVPVQAAPLTEVAPKSSNTQQPAHVQAFQSRLQAHADEASRSTGIPAKFMLGQAALESGWGRKEIMQANGTTSHNLFGIKASSGWHGKTVDAVTTEYIDGVAQRRIEKFRAYDSYADSFRDYAHLLKSNPRYQSVIANSQDAVGFAQGLQRAGYATDPHYATKLKQIINTSLA*