ggKbase home page

RTP_03222018_0_2um_scaffold_12136_7

Organism: RTP_03222018_0_2um_Betaproteobacteria_48_16

partial RP 38 / 55 BSCG 40 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(5856..6698)

Top 3 Functional Annotations

Value Algorithm Source
Putative Rod shape-determining protein mreC n=1 Tax=mine drainage metagenome RepID=E6QNQ6_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 53.8
  • Coverage: 277.0
  • Bit_score: 307
  • Evalue 1.00e-80
Putative Rod shape-determining protein mreC {ECO:0000313|EMBL:CBI08877.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.8
  • Coverage: 277.0
  • Bit_score: 307
  • Evalue 1.50e-80
mreC; rod shape-determining protein mrec similarity KEGG
DB: KEGG
  • Identity: 42.8
  • Coverage: 271.0
  • Bit_score: 235
  • Evalue 1.10e-59

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

mine drainage metagenome

Sequences

DNA sequence
Length: 843
ATGCCCGCGCGTCACCCTCACATCAACTTGTTTCCGCACGGTATCAGTGCGGGAGCACGGTTGATAATTTATCTTTTACTCAGCATCACCGTCATCGTTGCTGACGTACGCTTCCACACGCTGGATAAGTTTCGTGCCAGTATGAATACGCTCATTTATCCGCTGACTGAGCTGGTACAGGCACCTTACCTCACTTATGAAAAAATCAGCGGCTTTTTCATTAAACACATCCAGTTGCAGCGAGACAATAACGCGCTGCAACAGCGTTTCATCAGCTATAGCGCAACAGTACAGCGCTATCAAGACCTAGAACAAGAGAACCAACATCTACGCGCGCTACTCGGTGCACAAAGTCGCATACCACTACACACACAGCTCGCTGAAATTATCGCCATCCCGCGTGACCCGTACCTACGTCAAGTCACCATTAATCGCGGCAGCCAGCAAGGCATAAAAGCAGGTACCGCCGCTATCGACGAAGCCGGCTTATTAGGGCAAATCACTCAAGTTTACCCCTACACAAGCACGATTACCCTGATCACCAACCAAGACCAATCTGTTCCTGTAGCAGTACAACGCACAGGACAACGCGCGGTCTTATTTGGCACCGGCATCGACGACACGGTAGAAATTCGTTACTTACCCCACAGCACGGATGTGCGTACAGGCGATTTAATCATAACCTCAGGCATGGATGGTATTTATCCATCAGGTCTAGCCGTTGCCAAAGTCACCCAAATCGACCTGAGCAGCACCCGTGCTTTTGCCCATATCGTCTGCAAGCCACTCGCGGCAGTTGACCGTAACCGCCAGTTATTGATCATCAATACGAGCAAACCCTGA
PROTEIN sequence
Length: 281
MPARHPHINLFPHGISAGARLIIYLLLSITVIVADVRFHTLDKFRASMNTLIYPLTELVQAPYLTYEKISGFFIKHIQLQRDNNALQQRFISYSATVQRYQDLEQENQHLRALLGAQSRIPLHTQLAEIIAIPRDPYLRQVTINRGSQQGIKAGTAAIDEAGLLGQITQVYPYTSTITLITNQDQSVPVAVQRTGQRAVLFGTGIDDTVEIRYLPHSTDVRTGDLIITSGMDGIYPSGLAVAKVTQIDLSSTRAFAHIVCKPLAAVDRNRQLLIINTSKP*