Consensus taxonomy: Bacteroidetes → Bacteria
Contig (seq size) | Coding Density (%) | Species | Genus | Order | Class | Phylum | Domain |
---|---|---|---|---|---|---|---|
RTP_07252018_0_1um_scaffold_12174
3642 bp | 7.45 x | 46.05% |
0.950577 |
RIFOXYD2_FULL_Sph...
75.00%
|
unknown
75.00%
|
unknown
75.00%
|
Sphingobacteria
75.00%
|
Bacteroidetes
100.00%
|
Bacteria
100.00%
|
RTP_07252018_0_1um_scaffold_26403
3633 bp | 5.41 x | 44.98% |
0.772915 |
Pedobacter heparinus
25.00%
|
Pedobacter
25.00%
|
Sphingobacteriales
75.00%
|
Sphingobacteriia
75.00%
|
Bacteroidetes
100.00%
|
Bacteria
100.00%
|
RTP_07252018_0_1um_scaffold_12240
3632 bp | 6.81 x | 43.64% |
0.952368 |
Emticicia oligotr...
33.33%
|
Emticicia
33.33%
|
Cytophagales
66.67%
|
Cytophagia
66.67%
|
Bacteroidetes
66.67%
|
Bacteria
66.67%
|
RTP_07252018_0_1um_scaffold_12251
3630 bp | 5.83 x | 46.36% |
0.954545 |
RIFOXYD2_FULL_Sph...
75.00%
|
unknown
75.00%
|
unknown
75.00%
|
Sphingobacteria
75.00%
|
Bacteroidetes
100.00%
|
Bacteria
100.00%
|
RTP_07252018_0_1um_scaffold_12270
3626 bp | 7.40 x | 45.53% |
0.998621 |
RIFOXYD2_FULL_Sph...
100.00%
|
unknown
100.00%
|
unknown
100.00%
|
Sphingobacteria
100.00%
|
Bacteroidetes
100.00%
|
Bacteria
100.00%
|
RTP_07252018_0_1um_scaffold_12284
3623 bp | 6.17 x | 46.34% |
0.95225 |
Emticicia oligotr...
33.33%
|
Emticicia
33.33%
|
Sphingobacteriales
66.67%
|
Sphingobacteriia
66.67%
|
Bacteroidetes
100.00%
|
Bacteria
100.00%
|
RTP_07252018_0_1um_scaffold_12321
3617 bp | 6.93 x | 42.38% |
0.898258 |
Haliscomenobacter...
28.57%
|
Haliscomenobacter
28.57%
|
Sphingobacteriales
42.86%
|
Sphingobacteriia
42.86%
|
Bacteroidetes
57.14%
|
Bacteria
85.71%
|
RTP_07252018_0_1um_scaffold_17566
3608 bp | 4.49 x | 44.35% |
0.932095 |
RIFOXYD2_FULL_Sph...
66.67%
|
unknown
66.67%
|
unknown
66.67%
|
Sphingobacteria
66.67%
|
Bacteroidetes
100.00%
|
Bacteria
100.00%
|
RTP_07252018_0_1um_scaffold_34095
3606 bp | 6.24 x | 42.65% |
0.859401 |
RIFOXYD2_FULL_Sph...
50.00%
|
unknown
50.00%
|
Sphingobacteriales
50.00%
|
Sphingobacteriia
50.00%
|
Bacteroidetes
100.00%
|
Bacteria
100.00%
|
RTP_07252018_0_1um_scaffold_12386
3603 bp | 10.03 x | 45.13% |
0.733555 |
Niastella koreensis
66.67%
|
Niastella
66.67%
|
Sphingobacteriales
66.67%
|
Sphingobacteriia
66.67%
|
Bacteroidetes
100.00%
|
Bacteria
100.00%
|
RTP_07252018_0_1um_scaffold_12503
3581 bp | 6.49 x | 44.18% |
0.898073 |
RIFOXYD2_FULL_Sph...
80.00%
|
unknown
80.00%
|
unknown
80.00%
|
Sphingobacteria
80.00%
|
Bacteroidetes
100.00%
|
Bacteria
100.00%
|
RTP_07252018_0_1um_scaffold_23085
3563 bp | 5.81 x | 42.52% |
0.734493 |
Niastella koreensis
50.00%
|
Niastella
50.00%
|
Sphingobacteriales
50.00%
|
Sphingobacteriia
50.00%
|
Bacteroidetes
75.00%
|
Bacteria
75.00%
|
RTP_07252018_0_1um_scaffold_12810
3532 bp | 6.80 x | 46.26% |
0.947905 |
RIFOXYD2_FULL_Sph...
60.00%
|
unknown
80.00%
|
unknown
80.00%
|
Sphingobacteria
60.00%
|
Bacteroidetes
80.00%
|
Bacteria
80.00%
|
RTP_07252018_0_1um_scaffold_12825
3529 bp | 6.08 x | 45.40% |
0.953811 |
RIFOXYD2_FULL_Sph...
100.00%
|
unknown
100.00%
|
unknown
100.00%
|
Sphingobacteria
100.00%
|
Bacteroidetes
100.00%
|
Bacteria
100.00%
|
RTP_07252018_0_1um_scaffold_12881
3518 bp | 6.52 x | 43.32% |
0.885162 |
RIFOXYD2_FULL_Sph...
25.00%
|
Flavihumibacter
50.00%
|
Sphingobacteriales
50.00%
|
Sphingobacteriia
50.00%
|
Bacteroidetes
75.00%
|
Bacteria
75.00%
|
RTP_07252018_0_1um_scaffold_18266
3512 bp | 5.34 x | 44.05% |
0.966116 |
Niastella koreensis
66.67%
|
Niastella
66.67%
|
Sphingobacteriales
66.67%
|
Sphingobacteriia
66.67%
|
Bacteroidetes
100.00%
|
Bacteria
100.00%
|
RTP_07252018_0_1um_scaffold_19604
3509 bp | 6.37 x | 45.20% |
0.866914 |
RIFOXYD2_FULL_Sph...
75.00%
|
unknown
75.00%
|
unknown
75.00%
|
Sphingobacteria
75.00%
|
Bacteroidetes
100.00%
|
Bacteria
100.00%
|
RTP_07252018_0_1um_scaffold_12932
3508 bp | 5.73 x | 46.12% |
0.925314 |
RIFOXYD2_FULL_Sph...
75.00%
|
unknown
75.00%
|
unknown
75.00%
|
Sphingobacteria
75.00%
|
Bacteroidetes
100.00%
|
Bacteria
100.00%
|
RTP_07252018_0_1um_scaffold_13015
3493 bp | 5.58 x | 43.37% |
0.947323 |
RIFOXYD2_FULL_Sph...
100.00%
|
unknown
100.00%
|
unknown
100.00%
|
Sphingobacteria
100.00%
|
Bacteroidetes
100.00%
|
Bacteria
100.00%
|
RTP_07252018_0_1um_scaffold_13037
3491 bp | 5.33 x | 44.63% |
0.819822 |
RIFOXYD2_FULL_Sph...
50.00%
|
unknown
75.00%
|
unknown
75.00%
|
Sphingobacteria
50.00%
|
Bacteroidetes
75.00%
|
Bacteria
75.00%
|
RTP_07252018_0_1um_scaffold_13049
3489 bp | 4.82 x | 45.80% |
0.919175 |
RIFOXYD2_FULL_Sph...
66.67%
|
unknown
66.67%
|
unknown
66.67%
|
Sphingobacteria
66.67%
|
Bacteroidetes
100.00%
|
Bacteria
100.00%
|
RTP_07252018_0_1um_scaffold_25249
3476 bp | 5.22 x | 46.38% |
0.916571 |
Pedobacter sp. V48
40.00%
|
Pedobacter
80.00%
|
Sphingobacteriales
100.00%
|
Sphingobacteriia
100.00%
|
Bacteroidetes
100.00%
|
Bacteria
100.00%
|
RTP_07252018_0_1um_scaffold_18740
3474 bp | 6.39 x | 43.35% |
0.873921 |
Myroides profundi
20.00%
|
Myroides
20.00%
|
Flavobacteriales
40.00%
|
Flavobacteriia
40.00%
|
Bacteroidetes
60.00%
|
Bacteria
80.00%
|
RTP_07252018_0_1um_scaffold_19936
3448 bp | 5.66 x | 45.27% |
0.944896 |
RIFOXYD2_FULL_Sph...
100.00%
|
unknown
100.00%
|
unknown
100.00%
|
Sphingobacteria
100.00%
|
Bacteroidetes
100.00%
|
Bacteria
100.00%
|
RTP_07252018_0_1um_scaffold_33018
3443 bp | 6.32 x | 46.30% |
0.827766 |
RIFOXYD2_FULL_Sph...
71.43%
|
unknown
85.71%
|
unknown
85.71%
|
Sphingobacteria
71.43%
|
Bacteroidetes
85.71%
|
Bacteria
85.71%
|
RTP_07252018_0_1um_scaffold_13358
3439 bp | 5.36 x | 44.98% |
0.879325 |
Niastella koreensis
50.00%
|
Niastella
50.00%
|
Sphingobacteriales
75.00%
|
Sphingobacteriia
75.00%
|
Bacteroidetes
100.00%
|
Bacteria
100.00%
|
RTP_07252018_0_1um_scaffold_13372
3437 bp | 7.90 x | 45.21% |
0.975851 |
Pedobacter heparinus
50.00%
|
Pedobacter
50.00%
|
Sphingobacteriales
100.00%
|
Sphingobacteriia
100.00%
|
Bacteroidetes
100.00%
|
Bacteria
100.00%
|
RTP_07252018_0_1um_scaffold_13383
3434 bp | 6.77 x | 44.32% |
0.974956 |
Haliscomenobacter...
50.00%
|
Haliscomenobacter
50.00%
|
Sphingobacteriales
75.00%
|
Sphingobacteriia
75.00%
|
Bacteroidetes
75.00%
|
Bacteria
75.00%
|
RTP_07252018_0_1um_scaffold_21003
3432 bp | 6.86 x | 43.59% |
0.79458 |
RIFOXYD2_FULL_Sph...
100.00%
|
unknown
100.00%
|
unknown
100.00%
|
Sphingobacteria
100.00%
|
Bacteroidetes
100.00%
|
Bacteria
100.00%
|
RTP_07252018_0_1um_scaffold_26983
3429 bp | 4.94 x | 41.79% |
0.894138 |
Runella slithyformis
25.00%
|
Runella
25.00%
|
Cytophagales
50.00%
|
Cytophagia
50.00%
|
Bacteroidetes
100.00%
|
Bacteria
100.00%
|
RTP_07252018_0_1um_scaffold_13479
3418 bp | 4.65 x | 47.89% |
0.854008 |
Spirosoma linguale
25.00%
|
Spirosoma
25.00%
|
Sphingobacteriales
50.00%
|
Sphingobacteriia
50.00%
|
Bacteroidetes
75.00%
|
Bacteria
75.00%
|
RTP_07252018_0_1um_scaffold_13485
3417 bp | 6.10 x | 45.60% |
0.845478 |
Niabella soli
33.33%
|
Niabella
33.33%
|
Sphingobacteriales
33.33%
|
Sphingobacteriia
33.33%
|
Bacteroidetes
100.00%
|
Bacteria
100.00%
|
RTP_07252018_0_1um_scaffold_13517
3413 bp | 5.89 x | 45.59% |
0.909757 |
RIFOXYD2_FULL_Sph...
42.86%
|
unknown
85.71%
|
unknown
85.71%
|
Sphingobacteria
42.86%
|
Bacteroidetes
57.14%
|
Bacteria
57.14%
|
RTP_07252018_0_1um_scaffold_13675
3386 bp | 5.80 x | 45.95% |
0.834613 |
RIFOXYD2_FULL_Sph...
50.00%
|
unknown
50.00%
|
Sphingobacteriales
50.00%
|
Sphingobacteria
50.00%
|
Bacteroidetes
100.00%
|
Bacteria
100.00%
|
RTP_07252018_0_1um_scaffold_13738
3376 bp | 6.93 x | 47.87% |
0.960604 |
Chitinophaga pine...
25.00%
|
unknown
50.00%
|
Sphingobacteriales
50.00%
|
Sphingobacteriia
50.00%
|
Bacteroidetes
75.00%
|
Bacteria
75.00%
|
RTP_07252018_0_1um_scaffold_13774
3369 bp | 5.88 x | 42.62% |
0.82992 |
RIFOXYD2_FULL_Sph...
20.00%
|
unknown
40.00%
|
Cytophagales
40.00%
|
Cytophagia
40.00%
|
Bacteroidetes
80.00%
|
Bacteria
80.00%
|
RTP_07252018_0_1um_scaffold_13794
3366 bp | 6.55 x | 46.02% |
0.919786 |
RIFOXYD2_FULL_Sph...
60.00%
|
unknown
80.00%
|
unknown
80.00%
|
Sphingobacteria
60.00%
|
Bacteroidetes
80.00%
|
Bacteria
80.00%
|
RTP_07252018_0_1um_scaffold_13906
3349 bp | 6.67 x | 47.15% |
0.951329 |
Dyadobacter ferme...
25.00%
|
Dyadobacter
25.00%
|
Cytophagales
50.00%
|
Cytophagia
50.00%
|
Bacteroidetes
100.00%
|
Bacteria
100.00%
|
RTP_07252018_0_1um_scaffold_13922
3347 bp | 6.59 x | 46.13% |
0.760084 |
Saprospira grandis
33.33%
|
Saprospira
33.33%
|
Sphingobacteriales
33.33%
|
Sphingobacteriia
33.33%
|
Bacteroidetes
66.67%
|
Bacteria
100.00%
|
RTP_07252018_0_1um_scaffold_22107
3346 bp | 6.05 x | 43.16% |
0.783622 |
RIFOXYD2_FULL_Sph...
60.00%
|
unknown
80.00%
|
unknown
80.00%
|
Sphingobacteria
60.00%
|
Bacteroidetes
80.00%
|
Bacteria
80.00%
|
RTP_07252018_0_1um_scaffold_13931
3345 bp | 5.61 x | 46.34% |
0.900448 |
Flavihumibacter s...
25.00%
|
Flavihumibacter
25.00%
|
Sphingobacteriales
75.00%
|
Sphingobacteriia
75.00%
|
Bacteroidetes
75.00%
|
Bacteria
75.00%
|
RTP_07252018_0_1um_scaffold_14038
3326 bp | 6.49 x | 45.16% |
0.953397 |
RIFOXYD2_FULL_Sph...
100.00%
|
unknown
100.00%
|
unknown
100.00%
|
Sphingobacteria
100.00%
|
Bacteroidetes
100.00%
|
Bacteria
100.00%
|
RTP_07252018_0_1um_scaffold_22696
3308 bp | 6.26 x | 46.77% |
0.847944 |
Niastella koreensis
40.00%
|
Niastella
40.00%
|
Sphingobacteriales
40.00%
|
Sphingobacteriia
40.00%
|
Bacteroidetes
100.00%
|
Bacteria
100.00%
|
RTP_07252018_0_1um_scaffold_14171
3308 bp | 7.07 x | 46.16% |
0.962213 |
RIFOXYD2_FULL_Sph...
50.00%
|
unknown
50.00%
|
Sphingobacteriales
50.00%
|
Sphingobacteriia
50.00%
|
Bacteroidetes
100.00%
|
Bacteria
100.00%
|
RTP_07252018_0_1um_scaffold_14282
3289 bp | 5.29 x | 40.56% |
0.955002 |
Niastella koreensis
50.00%
|
Niastella
50.00%
|
Sphingobacteriales
100.00%
|
Sphingobacteriia
100.00%
|
Bacteroidetes
100.00%
|
Bacteria
100.00%
|
RTP_07252018_0_1um_scaffold_14372
3275 bp | 5.40 x | 43.82% |
0.914198 |
RIFOXYD2_FULL_Sph...
100.00%
|
unknown
100.00%
|
unknown
100.00%
|
Sphingobacteria
100.00%
|
Bacteroidetes
100.00%
|
Bacteria
100.00%
|
RTP_07252018_0_1um_scaffold_31723
3254 bp | 4.56 x | 45.54% |
0.929318 |
Pedobacter heparinus
25.00%
|
Pedobacter
25.00%
|
Sphingobacteriales
25.00%
|
Sphingobacteriia
25.00%
|
Bacteroidetes
75.00%
|
Bacteria
100.00%
|
RTP_07252018_0_1um_scaffold_14510
3254 bp | 4.38 x | 46.00% |
0.85464 |
Flavihumibacter s...
25.00%
|
unknown
75.00%
|
unknown
50.00%
|
Sphingobacteriia
25.00%
|
Bacteroidetes
100.00%
|
Bacteria
100.00%
|
RTP_07252018_0_1um_scaffold_14550
3249 bp | 6.28 x | 44.54% |
1.00646 |
Pedobacter glucos...
100.00%
|
Pedobacter
100.00%
|
Sphingobacteriales
100.00%
|
Sphingobacteriia
100.00%
|
Bacteroidetes
100.00%
|
Bacteria
100.00%
|
RTP_07252018_0_1um_scaffold_14575
3246 bp | 6.61 x | 45.75% |
0.749538 |
RIFOXYD2_FULL_Sph...
66.67%
|
unknown
66.67%
|
unknown
66.67%
|
Sphingobacteria
66.67%
|
Bacteroidetes
100.00%
|
Bacteria
100.00%
|