ggKbase home page

RTP_07252018_0_1um_scaffold_2249_2

Organism: RTP_07252018_0_1um_Hydrogenophilales_62_9

near complete RP 46 / 55 MC: 5 BSCG 44 / 51 MC: 3 ASCG 13 / 38 MC: 5
Location: 387..1514

Top 3 Functional Annotations

Value Algorithm Source
Pilus retraction protein PilT id=1358217 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb similarity UNIREF
DB: UNIREF100
  • Identity: 93.9
  • Coverage: 375.0
  • Bit_score: 696
  • Evalue 1.10e-197
pilus retraction protein PilT similarity KEGG
DB: KEGG
  • Identity: 93.1
  • Coverage: 375.0
  • Bit_score: 691
  • Evalue 7.40e-197
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 97.9
  • Coverage: 375.0
  • Bit_score: 719
  • Evalue 1.30e-204

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1128
ATGAACGCTGAAAAAACCATCCACGACCTGCTGCGCCTGATGCTGGCGAAGAATGCGTCCGACCTGTTCATCACCGCGGGTTTCCCGCCCGCGTTCAAGGTCGATGGCAAGATCACCCCGGTGTCGAATCAGACTCTGACGCCTGCGCACACCAGCGAACTGGCGCGCTCGATCATGAACGACCGGCAATGGAGCGATTTCGAGGCAACCAACGAATCCAACTTCGCCATCAGCCCGCCCGAAATCGGCCGTTTCCGGGTCAACGTATTCGTCCAGCAGGGACGCGTCGGCATCGTGATGCGGACGATCGTGACCAAGATACCCAAAATGGGCGACCTCAACCTGCCGCCGATCATGCGCGATGTCGCCATGATCAAGCGCGGTCTGGTAATTTTCGTCGGCGCGACCGGCTCCGGCAAATCGACCTCGCTCGCCGCCCTGATCGGGCATCGCAACGAGAACGCGGCCGACCACATCATCACGGTCGAAGACCCGATCGAATACGTGCACGAGCACAACAAGTCCATCATCACCCAGCGCGAGGTCGGCATCGACACCGACAACTGGTTCTCGGCGCTGAAGAACACCCTGCGGCAAGCGCCCGACGTCATCCTGATCGGTGAGATCCGCGATCGCGAGACCATGGAATACGCCATCGCCTTCGCCGAAACCGGTCACCTCTGCCTGTCGACGCTGCACGCCAACAGCGCCAACCAGGCGCTCGACCGCATCATCAACTTCTTCCCGGAGGAGCGGCGCGACCAGCTGCTGATGGACCTGTCGCTCAACCTCAAGGCCTTCATCTCGCAGCGGTTGATCCCGCGCAAGGGCGTGGCCGGGCGCGTGGCCGCGGTCGAAATCCTGCTCAACTCGCCGCTGATCGCCGACCTGATCTTCAAGGGCCAGGTGCATGAAATCAAGGAAATCATGTCGAAATCGCGCGAACTTGGCATGCAAACCTTCGACCAAGCGCTGTTCGACCTCTACGAGGCAGGCATGATCAGCTACGAAGACGCGCTCAGAAACGCCGACAGCCTCAACGACCTGCGTCTGCAGATCAAGCTACACGGCCAGGAAGCCAAGGGCCGCGACATGATGGCGGGACTGGATCACCTCGGCATCGTGTAA
PROTEIN sequence
Length: 376
MNAEKTIHDLLRLMLAKNASDLFITAGFPPAFKVDGKITPVSNQTLTPAHTSELARSIMNDRQWSDFEATNESNFAISPPEIGRFRVNVFVQQGRVGIVMRTIVTKIPKMGDLNLPPIMRDVAMIKRGLVIFVGATGSGKSTSLAALIGHRNENAADHIITVEDPIEYVHEHNKSIITQREVGIDTDNWFSALKNTLRQAPDVILIGEIRDRETMEYAIAFAETGHLCLSTLHANSANQALDRIINFFPEERRDQLLMDLSLNLKAFISQRLIPRKGVAGRVAAVEILLNSPLIADLIFKGQVHEIKEIMSKSRELGMQTFDQALFDLYEAGMISYEDALRNADSLNDLRLQIKLHGQEAKGRDMMAGLDHLGIV*