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RTP_07252018_0_1um_Hydrogenophilales_62_9

RTP_07252018_0_1um_RIFOXYD1_FULL_Hydrogenophilales_62_11_curated_62_9
In projects: RTP_07252018_0_1um  |  SOB_across_mines  |  SOB_across_mines

Consensus taxonomy: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated  →  Hydrogenophilales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 301-350 of 614 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
RTP_07252018_0_1um_scaffold_21662
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 2490 bp 60.80 11.27 93.25
RTP_07252018_0_1um_scaffold_46513
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 1464 bp 65.57 5.84 95.08
RTP_07252018_0_1um_scaffold_68577
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 1090 bp 58.62 7.57 92.48
RTP_07252018_0_1um_scaffold_21409
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 2510 bp 62.75 14.64 97.53
RTP_07252018_0_1um_scaffold_27425
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 2126 bp 61.95 5.08 92.71
RTP_07252018_0_1um_scaffold_49622
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 1396 bp 64.40 6.88 89.18
RTP_07252018_0_1um_scaffold_16615
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 2976 bp 66.47 9.63 96.67
RTP_07252018_0_1um_scaffold_11784
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 3719 bp 63.83 9.96 92.44
RTP_07252018_0_1um_scaffold_17691
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 2855 bp 60.77 4.94 96.46
RTP_07252018_0_1um_scaffold_38020
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 1694 bp 64.88 8.23 87.13
RTP_07252018_0_1um_scaffold_44812
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 1505 bp 62.33 5.18 92.69
RTP_07252018_0_1um_scaffold_15392
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 3132 bp 62.20 9.82 91.67
RTP_07252018_0_1um_scaffold_7921
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 4853 bp 64.68 8.04 89.57
RTP_07252018_0_1um_scaffold_26745
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 2164 bp 65.76 6.24 96.63
RTP_07252018_0_1um_scaffold_57357
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 1251 bp 65.95 5.28 99.28
RTP_07252018_0_1um_scaffold_10192
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 4092 bp 58.46 9.09 100.95
RTP_07252018_0_1um_scaffold_11812
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 3715 bp 58.60 6.90 90.44
RTP_07252018_0_1um_scaffold_44325
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 1517 bp 53.99 4.45 57.35
RTP_07252018_0_1um_scaffold_24606
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 2288 bp 64.07 9.44 97.95
RTP_07252018_0_1um_scaffold_15418
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 3129 bp 59.16 8.25 91.75
RTP_07252018_0_1um_scaffold_29320
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 2031 bp 65.58 16.10 100.30
RTP_07252018_0_1um_scaffold_29324
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 2030 bp 63.99 5.32 94.58
RTP_07252018_0_1um_scaffold_26527
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 2177 bp 66.56 6.75 81.58
RTP_07252018_0_1um_scaffold_53402
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 1320 bp 64.47 5.45 82.95
RTP_07252018_0_1um_scaffold_38581
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 1677 bp 65.89 6.89 99.28
RTP_07252018_0_1um_scaffold_54526
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 1847 bp 62.75 6.82 92.58
RTP_07252018_0_1um_scaffold_64882
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 1137 bp 62.88 3.83 106.07
RTP_07252018_0_1um_scaffold_27754
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 2109 bp 60.93 6.97 79.94
RTP_07252018_0_1um_scaffold_11076
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 3871 bp 59.11 8.83 89.36
RTP_07252018_0_1um_scaffold_21756
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 2482 bp 59.99 9.79 95.85
RTP_07252018_0_1um_scaffold_35075
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 1790 bp 61.56 6.45 81.96
RTP_07252018_0_1um_scaffold_36709
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 1736 bp 65.26 4.41 99.54
RTP_07252018_0_1um_scaffold_24911
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 2270 bp 58.28 5.81 88.81
RTP_07252018_0_1um_scaffold_29879
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 2005 bp 64.34 6.43 84.84
RTP_07252018_0_1um_scaffold_36975
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 1727 bp 63.23 9.99 100.93
RTP_07252018_0_1um_scaffold_11105
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 3864 bp 60.25 10.48 88.12
RTP_07252018_0_1um_scaffold_19969
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 3792 bp 63.00 7.20 91.22
RTP_07252018_0_1um_scaffold_37562
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 1708 bp 67.27 8.96 96.60
RTP_07252018_0_1um_scaffold_30190
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 1991 bp 66.55 6.78 96.28
RTP_07252018_0_1um_scaffold_17015
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 2929 bp 65.14 6.66 79.99
RTP_07252018_0_1um_scaffold_41762
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 1583 bp 65.13 8.34 94.57
RTP_07252018_0_1um_scaffold_47237
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 1449 bp 67.15 5.49 91.51
RTP_07252018_0_1um_scaffold_26325
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 2189 bp 66.38 8.57 100.32
RTP_07252018_0_1um_scaffold_12554
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 3573 bp 65.35 7.43 92.19
RTP_07252018_0_1um_scaffold_45354
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 1491 bp 58.15 7.65 57.34
RTP_07252018_0_1um_scaffold_23148
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 2384 bp 54.87 6.29 67.20
RTP_07252018_0_1um_scaffold_76318
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 1000 bp 62.70 8.55 93.90
RTP_07252018_0_1um_scaffold_18054
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 4537 bp 60.97 7.80 82.06
RTP_07252018_0_1um_scaffold_46393
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 1467 bp 64.49 4.70 98.98
RTP_07252018_0_1um_scaffold_41267
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 1597 bp 61.62 4.70 95.24
Displaying items 301-350 of 614 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.