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RTP_07252018_0_1um_Hydrogenophilales_62_9

RTP_07252018_0_1um_RIFOXYD1_FULL_Hydrogenophilales_62_11_curated_62_9
In projects: RTP_07252018_0_1um  |  SOB_across_mines  |  SOB_across_mines

Consensus taxonomy: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated  →  Hydrogenophilales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 401-450 of 614 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
RTP_07252018_0_1um_scaffold_7531
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
6 5016 bp 57.89 6.16 73.39
RTP_07252018_0_1um_scaffold_21083
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 2536 bp 62.58 6.15 89.43
RTP_07252018_0_1um_scaffold_16308
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 3012 bp 64.54 6.13 99.10
RTP_07252018_0_1um_scaffold_17800
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (60%)
5 2842 bp 64.32 6.12 97.75
RTP_07252018_0_1um_scaffold_38758
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1671 bp 60.86 6.10 62.30
RTP_07252018_0_1um_scaffold_71020
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1059 bp 62.13 6.09 90.09
RTP_07252018_0_1um_scaffold_20202
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (75%)
4 2609 bp 60.44 6.09 82.33
RTP_07252018_0_1um_scaffold_35530
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1775 bp 65.63 6.08 79.94
RTP_07252018_0_1um_scaffold_44746
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1506 bp 61.02 6.08 76.69
RTP_07252018_0_1um_scaffold_61466
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1186 bp 61.64 6.07 81.20
RTP_07252018_0_1um_scaffold_66797
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1112 bp 60.16 6.07 79.05
RTP_07252018_0_1um_scaffold_41693
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1585 bp 64.92 6.06 99.56
RTP_07252018_0_1um_scaffold_41715
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1585 bp 53.94 6.06 88.20
RTP_07252018_0_1um_scaffold_20852
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 2553 bp 65.14 6.05 90.60
RTP_07252018_0_1um_scaffold_25143
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (60%)
5 2256 bp 59.18 6.05 79.79
RTP_07252018_0_1um_scaffold_76675
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 1838 bp 59.85 6.04 94.18
RTP_07252018_0_1um_scaffold_12061
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
4 3660 bp 63.25 6.02 87.21
RTP_07252018_0_1um_scaffold_23970
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 2327 bp 67.60 5.99 100.04
RTP_07252018_0_1um_scaffold_15932
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
4 3059 bp 63.09 5.98 91.60
RTP_07252018_0_1um_scaffold_67383
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1104 bp 64.40 5.98 95.92
RTP_07252018_0_1um_scaffold_46963
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1455 bp 64.54 5.98 99.79
RTP_07252018_0_1um_scaffold_55417
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1284 bp 59.74 5.96 98.83
RTP_07252018_0_1um_scaffold_46730
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 1459 bp 65.25 5.96 93.76
RTP_07252018_0_1um_scaffold_12305
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (60%)
5 3618 bp 60.59 5.93 96.19
RTP_07252018_0_1um_scaffold_5368
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (57.14%)
7 7078 bp 65.75 5.93 93.42
RTP_07252018_0_1um_scaffold_7849
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (60%)
5 4883 bp 62.73 5.93 93.45
RTP_07252018_0_1um_scaffold_61051
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1192 bp 62.42 5.91 96.14
RTP_07252018_0_1um_scaffold_36842
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1732 bp 66.28 5.89 96.30
RTP_07252018_0_1um_scaffold_72167
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1045 bp 64.69 5.89 99.90
RTP_07252018_0_1um_scaffold_62374
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1173 bp 58.91 5.88 100.26
RTP_07252018_0_1um_scaffold_57178
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1254 bp 57.89 5.86 86.60
RTP_07252018_0_1um_scaffold_58631
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1230 bp 62.11 5.85 88.54
RTP_07252018_0_1um_scaffold_29420
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 2026 bp 62.49 5.85 81.59
RTP_07252018_0_1um_scaffold_46513
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
3 1464 bp 65.57 5.84 95.08
RTP_07252018_0_1um_scaffold_16537
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
4 2984 bp 62.23 5.83 83.85
RTP_07252018_0_1um_scaffold_46344
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1468 bp 57.22 5.82 98.50
RTP_07252018_0_1um_scaffold_24911
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 2270 bp 58.28 5.81 88.81
RTP_07252018_0_1um_scaffold_20199
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 2609 bp 62.02 5.81 100.15
RTP_07252018_0_1um_scaffold_22816
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 2406 bp 64.34 5.80 96.51
RTP_07252018_0_1um_scaffold_11662
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (60%)
5 3747 bp 61.62 5.80 98.96
RTP_07252018_0_1um_scaffold_10570
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (60%)
5 3995 bp 58.07 5.78 89.44
RTP_07252018_0_1um_scaffold_70594
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1064 bp 64.76 5.78 99.81
RTP_07252018_0_1um_scaffold_42539
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1562 bp 65.36 5.76 99.68
RTP_07252018_0_1um_scaffold_43434
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
4 1539 bp 60.82 5.75 99.22
RTP_07252018_0_1um_scaffold_64026
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1149 bp 70.84 5.74 100.26
RTP_07252018_0_1um_scaffold_21428
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 2509 bp 67.56 5.74 100.08
RTP_07252018_0_1um_scaffold_71953
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1048 bp 63.17 5.73 100.76
RTP_07252018_0_1um_scaffold_54062
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
2 1308 bp 60.09 5.73 86.24
RTP_07252018_0_1um_scaffold_10150
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
4 4104 bp 63.38 5.70 94.59
RTP_07252018_0_1um_scaffold_30996
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
3 1954 bp 66.07 5.68 100.26
Displaying items 401-450 of 614 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.