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RTP_092018_0_1um_scaffold_17176_6

Organism: RTP_092018_0_1um_bin_28_55_57_0_85

partial RP 21 / 55 BSCG 25 / 51 MC: 2 ASCG 7 / 38
Location: 2852..3640

Top 3 Functional Annotations

Value Algorithm Source
ABC-type transport system periplasmic component id=12493395 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 60.8
  • Coverage: 311.0
  • Bit_score: 334
  • Evalue 7.40e-89
ABC-type transport system periplasmic component similarity KEGG
DB: KEGG
  • Identity: 59.7
  • Coverage: 308.0
  • Bit_score: 318
  • Evalue 1.20e-84
ABC-type transport system periplasmic component {ECO:0000313|EMBL:AAZ96931.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.7
  • Coverage: 308.0
  • Bit_score: 318
  • Evalue 5.90e-84

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 789
ATGAACAAACTGCATTTCAAGGTCGGGTTATTTGCCGCCGCATCGCTGCTGCTGGCTGCAATTTTCATTGTCTACCTGCTGCATGCGCGCGGCTTCTTCGAAAAAACCTTCCACCTGCAGCTGGCTGCCGCCAGTGCCGACGGCGTGGCGCCCGGTGTGCCGGTGGTGTTCTCCGGCATCGAGATCGGCCGCGTCACCACCGACCTCGGCGCCCCTGCGCTGCCCGACAACGCCACCATGCTGCTGCTCACGTCCGACATCAGCAAGGAAATTCCGGCGCTGGTCGAACGGGTCAAGGCAATCCTTGCCAACGTCGAATATCTCACCCGCAAGGATGGCGACATCAATGTCACGCTGGCCAACGTCAAGACCGTGACCGGGCGCATGACCGGCGAATATGGCATGCTCGAAGGCATACTGGGCAGCCCGGAAAAAGCCCGCGCGCTGACCGACTCGCTCGACAAGACCCGCGCCCTCATCACCAAACTCGACGGCCTGGCCGCCAAGGCGGATCAATGGCTGTTTGCCGAAAAAGGCGTGGCAGCGCAGACACGGGAATCGCTGGCCCAGATACGGCTGATGCTGAACGATGCGCAGTCGAGCCTGAAAAAGGCCGATGCCCTGATGACGAATGCCGTGGAGATTTCCGCCAACGTCAAGGACGGCACCCAGGACCTCGCCCAGTTGCGCACCGAAATCGACGATGCCGTGCGCAAGGCCAACGATCTGATCAACGAAATCAACAAGAAATGGCCCTTTGCCCGCGAACCCGAGGTGAAACTGCCATGA
PROTEIN sequence
Length: 263
MNKLHFKVGLFAAASLLLAAIFIVYLLHARGFFEKTFHLQLAAASADGVAPGVPVVFSGIEIGRVTTDLGAPALPDNATMLLLTSDISKEIPALVERVKAILANVEYLTRKDGDINVTLANVKTVTGRMTGEYGMLEGILGSPEKARALTDSLDKTRALITKLDGLAAKADQWLFAEKGVAAQTRESLAQIRLMLNDAQSSLKKADALMTNAVEISANVKDGTQDLAQLRTEIDDAVRKANDLINEINKKWPFAREPEVKLP*