ggKbase home page

RTP_092018_0_1um_scaffold_19001_7

Organism: RTP_092018_0_1um_bin_28_55_57_0_85

partial RP 21 / 55 BSCG 25 / 51 MC: 2 ASCG 7 / 38
Location: comp(3132..3437)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 102.0
  • Bit_score: 129
  • Evalue 2.00e-27
Shikimate kinase I (EC:2.7.1.71) similarity KEGG
DB: KEGG
  • Identity: 58.2
  • Coverage: 91.0
  • Bit_score: 103
  • Evalue 2.30e-20
Shikimate kinase n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8TCZ7_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 66.7
  • Coverage: 102.0
  • Bit_score: 129
  • Evalue 1.40e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hydrocarboniphaga effusa → Hydrocarboniphaga → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 306
ACAGGCATCGTACTCGCGACTGGCGGTGGTGCTGTGCTGAAGTCCGATAACCGCAAGCATCTCAAATCGCGCGGATACGTCGTGTATCTGCATGCCAGCGTCGCGCAGCAATTTGCGCGTGTTGAGCGCAGTGATAATCGCCCGCTGCTGGCCACTGGTGACCGCCGCGAAACGCTGATGCGGCTCTTTGCCGAACGCGATCCGCTGTATCGCGAAATCGCTGATCTTGTGCTCGACACTGACGGCAAGAATGCCAAGCAATTGGCCCGAGACATTGAGCTGGCCATGACCGGTGAAGCGACATGA
PROTEIN sequence
Length: 102
TGIVLATGGGAVLKSDNRKHLKSRGYVVYLHASVAQQFARVERSDNRPLLATGDRRETLMRLFAERDPLYREIADLVLDTDGKNAKQLARDIELAMTGEAT*