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RTP_092018_0_1um_scaffold_16840_4

Organism: RTP_092018_0_1um_bin_28_55_57_0_85

partial RP 21 / 55 BSCG 25 / 51 MC: 2 ASCG 7 / 38
Location: comp(1421..3088)

Top 3 Functional Annotations

Value Algorithm Source
2-isopropylmalate synthase (EC:2.3.3.13) similarity KEGG
DB: KEGG
  • Identity: 92.4
  • Coverage: 511.0
  • Bit_score: 918
  • Evalue 7.20e-265
2-isopropylmalate synthase {ECO:0000255|HAMAP-Rule:MF_01025}; EC=2.3.3.13 {ECO:0000255|HAMAP-Rule:MF_01025};; Alpha-IPM synthase {ECO:0000255|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000255|HAMAP-Rule:MF_01025}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.4
  • Coverage: 511.0
  • Bit_score: 918
  • Evalue 3.60e-264
2-isopropylmalate synthase n=1 Tax=Thiobacillus thioparus RepID=UPI0003828078 similarity UNIREF
DB: UNIREF100
  • Identity: 96.1
  • Coverage: 511.0
  • Bit_score: 953
  • Evalue 5.50e-275

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1668
ATGAAAGACCGTTTGTTTATTTTCGACACCACCTTGCGCGACGGCGAGCAAAGCCCCGGCGCGTCGATGACCCGCGACGAGAAAGTCCGCATCGCGCGCCAGCTGGAAAAGCTCGGCGTCGACGTCATCGAGGCCGGCTTCGCTGCCGCGAGCCCGGGCGACGCCGATGCGATCCGCACCATTGCCGAGACCATCCAGAACTCGACCATCTGTTCGCTGGCGCGTGCCAACGAACGCGACATCCATGCCGCCGGCGGCGCGATCAAACCCGCGAAGTCGGGGCGCATCCACACCTTCATCGCCACCAGCCCGATCCACATGGAAAAGAAGCTGCGCATGCAGCCGGATCAGGTGGTCGAGGCGGCGGTCAAGGCCGTGAAGCTCGCACTCGAATACACCGACGACGTCGAATTCTCGGCCGAGGACGCGGTGCGTTCCGACATGGATTTCCTCGTCCGCATCTTCGACGAGGTGATCAAGGCCGGTGCCAAGACCATCAACGTGCCCGACACCGTCGGCTACAGCATCCCGGCCTTGTGGGGCGAGCGCATGAAGCAGCTGATCGAGCGCGTGCCCGGCTCCGACAAGGTCGTCTGGTCGACCCACTGCCACAATGATCTCGGCATGGCGGTCGCCAACTCGCTTGCCGCGGTGATGAACGGCGCGCGCCAGGTCGAATGCACCATCAACGGCCTCGGCGAGCGTGCAGGCAATGCCTCGCTGGAAGAGATCGTGATGGCGGTGCGCACCCGCAAGGACGTTCCGGCGTCCAAGCTCGTCTCCACCATCACTGGCTATCCGGTCCAGCCCAACAAGGCCATCGTCGGCGCCAACGCCTTCGCCCATGAATCCGGCATCCACCAGGACGGCGTCCTCAAGCACCGCGAGACCTACGAAATCATGCGGGCCGAGGACGTGGGCTGGAATGCCAATCGCCTGACGCTCGGCAAACTTTCCGGCCGTGCCGCGTTCAAGAGCAAGCTTGCCGAGTTGGGCATTGTTCTGGAAACCGAAGAGTCGCTCAATACCGCGTTCGCCCGCTTCAAGAATCTGGCCGACAAGAAGCGCGAGATCTTCGACGAGGACCTTCAGGCGCTGGTGTCCGACGAGGGCTATGCCACCGAGCACGAACGCTTCAAGCTGGTGTCGATGAAAGTCTGTTCCGAGACCGGCGAGACGCCGCTTGCGCAACTGGTGTTCACCGACGACGGTGCGGAATGGCGAGCCAGCGGAGAGGGCTCGGGCCCGGTCGATGCGACCTTCAAGGCGCTGGAATCGGTGGTCCACAGCGGGGCGGACCTGCTGCTCTATTCGGTCAACAACATCACCAGCGGCACCGATGCGCAGGGCGAGGTGACGGTGCGGCTGGCGCAGGACGGGCGCGTGGTGAACGGGCAGGGTGCCGACACCGACATCGTGGTGGCCTCGGCCAAGGCCTATCTGCATGCGCTCAACAAGCTGCACAGCAAGCGTGAGCGCGCGCGTCCCCAGGTGTATGCCCGGCTCGATGGAAATGGCCCCGCCGGGGCGTTTCCATTGACCCGGCCGATCCGTCCCGGTAGGCTCCATGTCCATGAACGCGCAACACGTCATTTCCGCACCATACTTCGCCAAGCGACTGTGGCTAGGGTTCTCCCTGTGCCGCAGTCCGCTCCACGCTTAACTTAA
PROTEIN sequence
Length: 556
MKDRLFIFDTTLRDGEQSPGASMTRDEKVRIARQLEKLGVDVIEAGFAAASPGDADAIRTIAETIQNSTICSLARANERDIHAAGGAIKPAKSGRIHTFIATSPIHMEKKLRMQPDQVVEAAVKAVKLALEYTDDVEFSAEDAVRSDMDFLVRIFDEVIKAGAKTINVPDTVGYSIPALWGERMKQLIERVPGSDKVVWSTHCHNDLGMAVANSLAAVMNGARQVECTINGLGERAGNASLEEIVMAVRTRKDVPASKLVSTITGYPVQPNKAIVGANAFAHESGIHQDGVLKHRETYEIMRAEDVGWNANRLTLGKLSGRAAFKSKLAELGIVLETEESLNTAFARFKNLADKKREIFDEDLQALVSDEGYATEHERFKLVSMKVCSETGETPLAQLVFTDDGAEWRASGEGSGPVDATFKALESVVHSGADLLLYSVNNITSGTDAQGEVTVRLAQDGRVVNGQGADTDIVVASAKAYLHALNKLHSKRERARPQVYARLDGNGPAGAFPLTRPIRPGRLHVHERATRHFRTILRQATVARVLPVPQSAPRLT*