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RTP_092018_0_1um_scaffold_26505_3

Organism: RTP_092018_0_1um_bin_28_55_57_0_85

partial RP 21 / 55 BSCG 25 / 51 MC: 2 ASCG 7 / 38
Location: comp(1939..2643)

Top 3 Functional Annotations

Value Algorithm Source
nodulation protein NodJ n=1 Tax=Thiobacillus thioparus RepID=UPI0003738253 similarity UNIREF
DB: UNIREF100
  • Identity: 98.7
  • Coverage: 234.0
  • Bit_score: 463
  • Evalue 7.30e-128
ABC-2 type transporter, NodJ similarity KEGG
DB: KEGG
  • Identity: 89.7
  • Coverage: 234.0
  • Bit_score: 431
  • Evalue 8.70e-119
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.7
  • Coverage: 234.0
  • Bit_score: 431
  • Evalue 4.30e-118

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 705
CTCGCCATCCCGTCCATCCTCGGTAACCTGGCCGACCCGATGCTCTACATGCTGGGCCTGGGCTACGGCCTCGGCAGCCTGCTGCCGGACGTAGGCGGCATGCCCTACCTGACTTTCCTCGCCGCCGGCACCGTGGCCTACAGCACCATGAACGCCGCCACCTTCGAGGTGCTGTATTCGAGCTTCTCGCGCATGCACGTGCAGCGCTCCTGGGACGCGATCCTCAACGCGCCGATGACGCTCGACGACGTGATGCTGGGCGAACTGACCTGGGCCGCGTCCAAAAGCCTGCTCTCGGGCGTGGCGATCCTGGCGGTGATCTGGGGATTGGGGCTGTACGGAAACTTCTGGATGACGCTGTGGATCATCCCGGTCGTCGCCCTGGTCGGCTTCTGCTTCGGCGGCATGGGGCTGGTGATGAACGCGGTGTCGCCCAGCTACGACTTCTTTCTGTATTACTTCACGCTGGTGATCACACCGATGGTGCTCTTGTGCGGGGTGTTCTTCCCCGTGTCGCAGTTGCCTGCTGCCGTGCAAGGCGTGTCCGCCTGGCTGCCGCTCACCCACGCCATCGACCTCGCACGACCATTGGTCGTCGGCAACATACCAGACAACATCGCGCTGCACGTGATCGCGCTGCTGGTTTACGGCAGCCTCGGCTACATCGTCGCGCTGGCGTTCACTCGCAGACGGCTCCTGAAATAA
PROTEIN sequence
Length: 235
LAIPSILGNLADPMLYMLGLGYGLGSLLPDVGGMPYLTFLAAGTVAYSTMNAATFEVLYSSFSRMHVQRSWDAILNAPMTLDDVMLGELTWAASKSLLSGVAILAVIWGLGLYGNFWMTLWIIPVVALVGFCFGGMGLVMNAVSPSYDFFLYYFTLVITPMVLLCGVFFPVSQLPAAVQGVSAWLPLTHAIDLARPLVVGNIPDNIALHVIALLVYGSLGYIVALAFTRRRLLK*