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RTP_092018_0_1um_scaffold_27_37

Organism: RTP_092018_0_1um_Hydrogenophilales_62_10

near complete RP 49 / 55 BSCG 49 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: comp(50999..51433)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.7
  • Coverage: 143.0
  • Bit_score: 196
  • Evalue 1.40e-47
twitching motility protein PilT n=1 Tax=Leucothrix mucor RepID=UPI0003B4E34A similarity UNIREF
DB: UNIREF100
  • Identity: 71.6
  • Coverage: 141.0
  • Bit_score: 210
  • Evalue 6.80e-52
PilT domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 65.7
  • Coverage: 143.0
  • Bit_score: 196
  • Evalue 2.90e-48

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Taxonomy

Syntrophobacter fumaroxidans → Syntrophobacter → Syntrophobacterales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 435
GTGATTCTGGTGGATGCCAACCTGTTGATTTATGCCGTCAACCAGGACTTGCCCCAGCACAAGCTGGCTAGAGCCTGGTGGGAGCAGGTGCTTTCGGGTGCAGTCAGAGTCGGTATTCCCTGGGTGTCTGTTATGGCTTTTTTGCGCATTTGCACCAATCCGCGCATTTTTTCGTCGCCACTATCTCCCGAGGCGGCCATTGCCTACATTGACGAGTGGCTGGATCAGCCGCCTGTTCAACTGGTTGCTGCGGGGGCTGGGCACTGGGCCATTCTGCGCAATCTGCTGCTGCAAACCGGCATGGCGGCCAATCTCACGACCGATGCCCACATTGCCGCGCTGGCGCTGGAACAGGGGTATGGCGTTTATTCAGCGGACAACGATTTCCGTCGATTTCCCGGGTTAAAGCACATCAACCCGCTATCGGCTGGATAA
PROTEIN sequence
Length: 145
VILVDANLLIYAVNQDLPQHKLARAWWEQVLSGAVRVGIPWVSVMAFLRICTNPRIFSSPLSPEAAIAYIDEWLDQPPVQLVAAGAGHWAILRNLLLQTGMAANLTTDAHIAALALEQGYGVYSADNDFRRFPGLKHINPLSAG*