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RTP_09252017_14_Hydrogenophilales_65_8

In projects: RTP_09252017_14  |  SOB_across_mines

Consensus taxonomy: Hydrogenophilales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Taxonomy override: Betaproteobacteria

Displaying items 601-650 of 710 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
RTP_09252017_14_scaffold_67823
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1090 bp 65.78 3.17 99.63
RTP_09252017_14_scaffold_67835
Species: GWE1_Thiobacillus_62_9_curated (100%)
1 1090 bp 67.80 3.72 99.63
RTP_09252017_14_scaffold_42741
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1448 bp 64.85 4.14 99.65
RTP_09252017_14_scaffold_9347
Species: GWE1_Thiobacillus_62_9_curated (50%)
4 3269 bp 65.86 5.69 99.66
RTP_09252017_14_scaffold_57449
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (100%)
2 1210 bp 62.48 2.98 99.67
RTP_09252017_14_scaffold_51816
Species: GWE1_Thiobacillus_62_9_curated (100%)
1 1288 bp 66.38 6.41 99.69
RTP_09252017_14_scaffold_50343
Species: GWE1_Thiobacillus_62_9_curated (50%)
2 1312 bp 60.37 6.40 99.70
RTP_09252017_14_scaffold_47797
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1354 bp 68.98 7.98 99.70
RTP_09252017_14_scaffold_22147
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (100%)
3 2094 bp 59.74 10.39 99.71
RTP_09252017_14_scaffold_3130
Species: GWE1_Thiobacillus_62_9_curated (100%)
5 6008 bp 64.16 6.17 99.72
RTP_09252017_14_scaffold_43884
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1426 bp 63.04 4.94 99.72
RTP_09252017_14_scaffold_61346
Species: GWE1_Thiobacillus_62_9_curated (100%)
1 1161 bp 68.39 8.91 99.74
RTP_09252017_14_scaffold_60600
Species: GWE1_Thiobacillus_62_9_curated (100%)
1 1170 bp 68.12 6.92 99.74
RTP_09252017_14_scaffold_57693
Species: GWE1_Thiobacillus_62_9_curated (100%)
1 1206 bp 67.08 4.23 99.75
RTP_09252017_14_scaffold_57067
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1215 bp 61.48 2.84 99.75
RTP_09252017_14_scaffold_51500
Species: GWE1_Thiobacillus_62_9_curated (100%)
1 1293 bp 68.68 4.64 99.77
RTP_09252017_14_scaffold_2193
Species: GWE1_Thiobacillus_62_9_curated (64.29%)
14 7869 bp 66.06 9.55 99.77
RTP_09252017_14_scaffold_3905
Species: GWE1_Thiobacillus_62_9_curated (85.71%)
7 5265 bp 67.14 10.74 99.77
RTP_09252017_14_scaffold_46311
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (100%)
1 1380 bp 67.83 5.87 99.78
RTP_09252017_14_scaffold_25492
Order: Hydrogenophilales (66.67%)
3 1936 bp 64.98 4.11 99.79
RTP_09252017_14_scaffold_72264
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1046 bp 62.91 4.16 99.81
RTP_09252017_14_scaffold_72266
Species: GWE1_Thiobacillus_62_9_curated (100%)
1 1046 bp 58.13 4.45 99.81
RTP_09252017_14_scaffold_36908
Species: GWE1_Thiobacillus_62_9_curated (100%)
1 1575 bp 59.49 5.71 99.81
RTP_09252017_14_scaffold_71654
Species: GWE1_Thiobacillus_62_9_curated (50%)
2 1052 bp 55.51 3.56 99.81
RTP_09252017_14_scaffold_67432
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1094 bp 66.54 4.52 99.82
RTP_09252017_14_scaffold_34275
Order: Hydrogenophilales (66.67%)
3 1644 bp 64.11 4.74 99.82
RTP_09252017_14_scaffold_67138
Species: GWE1_Thiobacillus_62_9_curated (100%)
1 1097 bp 69.64 4.92 99.82
RTP_09252017_14_scaffold_66218
Species: GWE1_Thiobacillus_62_9_curated (100%)
1 1106 bp 66.18 4.75 99.82
RTP_09252017_14_scaffold_65448
Species: GWE1_Thiobacillus_62_9_curated (100%)
1 1115 bp 66.10 3.36 99.82
RTP_09252017_14_scaffold_61638
Species: GWE1_Thiobacillus_62_9_curated (100%)
1 1157 bp 66.55 4.28 99.83
RTP_09252017_14_scaffold_59900
Species: GWE1_Thiobacillus_62_9_curated (100%)
1 1178 bp 64.52 4.07 99.83
RTP_09252017_14_scaffold_59442
Species: GWE1_Thiobacillus_62_9_curated (50%)
2 1184 bp 68.16 4.18 99.83
RTP_09252017_14_scaffold_58524
Species: GWE1_Thiobacillus_62_9_curated (100%)
1 1196 bp 66.89 3.39 99.83
RTP_09252017_14_scaffold_57965
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1202 bp 61.15 4.49 99.83
RTP_09252017_14_scaffold_55768
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (100%)
1 1232 bp 66.07 4.38 99.84
RTP_09252017_14_scaffold_54504
Order: Hydrogenophilales (100%)
3 1250 bp 66.00 4.08 99.84
RTP_09252017_14_scaffold_51519
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (100%)
1 1292 bp 66.56 4.30 99.85
RTP_09252017_14_scaffold_50965
Species: GWE1_Thiobacillus_62_9_curated (100%)
1 1301 bp 65.56 6.23 99.85
RTP_09252017_14_scaffold_38457
Species: GWE1_Thiobacillus_62_9_curated (100%)
1 1538 bp 65.02 6.83 99.87
RTP_09252017_14_scaffold_36612
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1583 bp 66.65 7.11 99.87
RTP_09252017_14_scaffold_34342
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)
2 1643 bp 65.79 3.83 99.88
RTP_09252017_14_scaffold_13404
Species: GWE1_Thiobacillus_62_9_curated (100%)
1 2727 bp 67.77 10.18 99.89
RTP_09252017_14_scaffold_25770
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (100%)
2 1925 bp 58.96 7.71 99.90
RTP_09252017_14_scaffold_67536
Species: GWE1_Thiobacillus_62_9_curated (100%)
1 1093 bp 64.78 4.12 99.91
RTP_09252017_14_scaffold_62029
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1153 bp 69.38 3.38 99.91
RTP_09252017_14_scaffold_18420
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 2309 bp 63.62 3.83 99.91
RTP_09252017_14_scaffold_15809
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 2501 bp 68.73 8.52 99.92
RTP_09252017_14_scaffold_53958
Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
1 1258 bp 68.84 6.32 99.92
RTP_09252017_14_scaffold_48729
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (100%)
1 1339 bp 66.62 4.93 99.93
RTP_09252017_14_scaffold_45599
Species: RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (100%)
1 1393 bp 67.05 3.34 99.93
Displaying items 601-650 of 710 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.