ggKbase home page

RTP_11222018_0_1um_scaffold_347_31

Organism: RTP_11222018_0_1um_Betaproteobacteria_47_59

near complete RP 50 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(35243..35854)

Top 3 Functional Annotations

Value Algorithm Source
Putative exporter of the RND superfamily n=1 Tax=gamma proteobacterium IMCC2047 RepID=F3KD67_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 50.7
  • Coverage: 201.0
  • Bit_score: 204
  • Evalue 9.00e-50
RND transporter {ECO:0000313|EMBL:KHD12889.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.6
  • Coverage: 196.0
  • Bit_score: 204
  • Evalue 9.70e-50
conserved hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 49.5
  • Coverage: 196.0
  • Bit_score: 201
  • Evalue 2.20e-49

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Thiomargarita nelsonii → Thiomargarita → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 612
AGTATGGTATTTAGTGAAGTGCCGCCATTCCAAACCCTCGGTGTGATTGTTGCGGTTGGTATTATGACTGGTTTCTTGGTGTCAGTGATGCTGATTCCAGCGGTGATGATGATGTTGCCTGGTAAAGTTGGGCAAGTCCATTCTCGCGAAGATGAAAAAATATCATTGATGGAGCGTTACACCGAGTTTTTCTTGAAGCATAGAAATAAAATGTTGGTGGGTAGCTTGACGGTGACGCTAGTGCTGGGCTCATTTATTACGCGTAACGAGTTTAATGATTCATTCCACAAGTATTTTGCTGAAAGCACTGAATTCCGTCAAGCAACTGATTTCACATTAAAAAATCTGACGGGTGTCTATCTAATCGATTATTCGCTCTCAGCAGGTCAGCCTTCCTATGTGAATGACCCTGCATTTTTGAAAAAAGTGGATGAATTTGCACAATGGTATCGTTTACAGCCTGAAGTGTTGCATGTGAATACCTTCACCGACATCATGAAGCGCTTGAACAAAAATATGCACGCTGATGATCCCGCGTATAGCAAGTTACCAGATGAGCGTGAGCTGGCTGCGCAATATTTGTTGATTGCCGTATGGCTTGGATTTGAATGA
PROTEIN sequence
Length: 204
SMVFSEVPPFQTLGVIVAVGIMTGFLVSVMLIPAVMMMLPGKVGQVHSREDEKISLMERYTEFFLKHRNKMLVGSLTVTLVLGSFITRNEFNDSFHKYFAESTEFRQATDFTLKNLTGVYLIDYSLSAGQPSYVNDPAFLKKVDEFAQWYRLQPEVLHVNTFTDIMKRLNKNMHADDPAYSKLPDERELAAQYLLIAVWLGFE*