ggKbase home page

ACD10_14_4

Organism: ACD10

near complete RP 47 / 55 MC: 19 BSCG 44 / 51 MC: 10 ASCG 0 / 38
Location: comp(997..1335)

Top 3 Functional Annotations

Value Algorithm Source
small-conductance mechanosensitive channel protein similarity KEGG
DB: KEGG
  • Identity: 72.0
  • Coverage: 107.0
  • Bit_score: 162
  • Evalue 8.00e-38
MS_channel (db=HMMPfam db_id=PF00924 from=2 to=94 evalue=5.6e-18 interpro_id=IPR006685 interpro_description=Mechanosensitive ion channel MscS GO=Cellular Component: membrane (GO:0016020), Biological Process: transmembrane transport (GO:0055085)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 5.60e-18
Mechanosensitive channel protein MscS (YggB), C-terminal domain (db=superfamily db_id=SSF82689 from=1 to=104 evalue=7.1e-17 interpro_id=IPR011066 interpro_description=Mechanosensitive ion channel MscS, C-terminal GO=Cellular Component: membrane (GO:0016020)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 7.10e-17

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 339
ATGAGCCATCGGCGAATCAAGGAAACCATCGGCATCCGCTATCAGGACATCGGCAAAATGTCCGCCATCGTCGCTGACGTCAAAAAAATGCTGGCCGAACATCCGGAGATCGACGAAACACAGACGCTTATTGTCAATTTCAACGCCTTTGCCGACTCATCGCTCAATTTTTTCATTTACACCTTCACGAAAACCGTCGCCTGGGTGCATTTCCATGCCGTGAAACAAGATATCCTGCTCCGCATTGCCGACATCATCGCCAGCCACGGCGCTGAAATAGCCTTCCCGACACACACCTTGCACATCGACCGCCTGCCGCCCACTGAACACCCGATTTAG
PROTEIN sequence
Length: 113
MSHRRIKETIGIRYQDIGKMSAIVADVKKMLAEHPEIDETQTLIVNFNAFADSSLNFFIYTFTKTVAWVHFHAVKQDILLRIADIIASHGAEIAFPTHTLHIDRLPPTEHPI*