ggKbase home page

ACD1_5_55

Organism: ACD1

near complete RP 51 / 55 MC: 12 BSCG 49 / 51 MC: 2 ASCG 0 / 38
Location: comp(59384..60553)

Top 3 Functional Annotations

Value Algorithm Source
thiouridylase similarity KEGG
DB: KEGG
  • Identity: 44.3
  • Coverage: 393.0
  • Bit_score: 313
  • Evalue 9.70e-83
trmU: tRNA (5-methylaminomethyl-2-thiouridyl (db=HMMTigr db_id=TIGR00420 from=8 to=387 evalue=7.5e-135 interpro_id=IPR004506 interpro_description=tRNA-specific 2-thiouridylase GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: tRNA processing (GO:0008033), Molecular Function: transferase activity (GO:0016740)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 7.50e-135
tRNA_Me_trans (db=HMMPfam db_id=PF03054 from=8 to=387 evalue=8.4e-118) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 8.40e-118

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 1170
ATGAACAAAAAATCGCCAAAAAAACGAGTGATTGTGGGGATGAGCGCGGGAGTTGATTCTTCCGTGGCGGCCGCACTTCTGAAAGAGCAGGGCTATGACGTCGTGGGAGTTTTTTTGCATTTCTGGAAAGAACCTGGCCAGGATGCTCTCAGGGAAAATAAGTGTTGCTCGGTGGAATCACAGCAAGATGCTCGTAAAGTTGCTCAGCTTTTGGATATCCCACTTTATACTGTGAATGCAGCGGCGGAATTTAAAAAAGAAGTTGTGGATTATTTTTTGGAAGAAACTAAAGCTGGAAGAACTCCAAATCCATGCGTAGTTTGCAACGAAAGAATAAAATTCAATTTTCTCTTTAAGAAAATGTTGGAGATGGGTGCTGATTTTGTGGCAACCGGTCATTATGCGGAGCTTAAAAATATTGATGGAAAATTTCATCTCTATACATCAACTGATGAGGAAAAAGACCAGACTTATTTTTTGTATTCAGTTTCGCAGAAACAACTTTCCAGAATTTTGTTTCCAGTTGGAGGATATAAAAAACCCGAAATTAGAAAAATTGCTGAAAAAATCAATTTGCCGGTTTTTGATAAGGAGGATTCCCAAGGATTATGTTTTACGCCGGAAAAAACTCCAACCAAATTCATTAAACGAAATTTGTCTTTATCGGCAGGTGACATTGTGACGACTGAAGGCCCGCCTCGCGTCGACGAACAAGGCGTCTTGCGAGTCGAGGCGGGAAAAAAGATTGGAACACATGAAGGACTGGAGCTTTATACGCTTGGACAAAGAAAGGGAATCAATATTGGAGGCAACGGTCCCTATTTCGTTGTTGAGCGGGATTTTAAAAACAATATCCTGATCGTTACAAATGACGAACAAGATGAAAAAATTTACAAAAAAAGTATGCTGGTTGAGGTGAAAAGTTGGATTGCGGAAAAGCCGTCATTGCCCTTGGAAGTTAATGTGAAAATCAGATACAGACACCCGTTGGTTAGGTGTATAATTAAAAGCGTTTCCACATCTGATCAGAAAAATATAAGGATAGCTAGAGATGCCGAACTGTATGAGGTGGAATTTTTAGAAAAACAAAAGGCCGTCACACCGGGACAATCAGCAGTTTTTTATGCGGATGATAATGAAGTTTTAGGGGGAGGAACGATTCTTGGATAA
PROTEIN sequence
Length: 390
MNKKSPKKRVIVGMSAGVDSSVAAALLKEQGYDVVGVFLHFWKEPGQDALRENKCCSVESQQDARKVAQLLDIPLYTVNAAAEFKKEVVDYFLEETKAGRTPNPCVVCNERIKFNFLFKKMLEMGADFVATGHYAELKNIDGKFHLYTSTDEEKDQTYFLYSVSQKQLSRILFPVGGYKKPEIRKIAEKINLPVFDKEDSQGLCFTPEKTPTKFIKRNLSLSAGDIVTTEGPPRVDEQGVLRVEAGKKIGTHEGLELYTLGQRKGINIGGNGPYFVVERDFKNNILIVTNDEQDEKIYKKSMLVEVKSWIAEKPSLPLEVNVKIRYRHPLVRCIIKSVSTSDQKNIRIARDAELYEVEFLEKQKAVTPGQSAVFYADDNEVLGGGTILG*