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ACD1_33_1

Organism: ACD1

near complete RP 51 / 55 MC: 12 BSCG 49 / 51 MC: 2 ASCG 0 / 38
Location: comp(50..265)

Top 3 Functional Annotations

Value Algorithm Source
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family) (db=KEGG evalue=8.0e-09 bit_score=62.4 identity=53.12 coverage=86.1111111111111) similarity KEGG
DB: KEGG
  • Identity: 53.12
  • Coverage: 86.11
  • Bit_score: 62
  • Evalue 8.00e-09
CSD (db=HMMPfam db_id=PF00313 from=3 to=66 evalue=1.2e-18 interpro_id=IPR002059 interpro_description=Cold-shock protein, DNA-binding GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.20e-18
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=1 to=68 evalue=1.4e-16 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.40e-16

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Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 216
ATGCCAATTGGAATAGTGAAAGATTTTGACGATGCCAAAGGATTCGGATTCATAGGCCGGCGACATGGAGCAGATCTCTATGTCCATCATTCCAAGATTATGCACCAAATAGGCAGAAAAACACTCAAGATTGATGACGAAGTCACTTTCGAAATCGCCAACACCCGCAATGGACCCATTGCAATAAACGTCTGGCGAAGTTCCCTGGCAAGATAA
PROTEIN sequence
Length: 72
MPIGIVKDFDDAKGFGFIGRRHGADLYVHHSKIMHQIGRKTLKIDDEVTFEIANTRNGPIAINVWRSSLAR*