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ACD1_56_51

Organism: ACD1

near complete RP 51 / 55 MC: 12 BSCG 49 / 51 MC: 2 ASCG 0 / 38
Location: comp(55188..55643)

Top 3 Functional Annotations

Value Algorithm Source
greA; transcription elongation factor GreA; K03624 transcription elongation factor GreA (db=KEGG evalue=2.0e-30 bit_score=134.0 identity=49.67 coverage=96.0526315789474) similarity KEGG
DB: KEGG
  • Identity: 49.67
  • Coverage: 96.05
  • Bit_score: 134
  • Evalue 2.00e-30
coiled-coil (db=Coil db_id=coil from=7 to=35 evalue=NA) iprscan interpro
DB: Coil
  • Identity: null
  • Coverage: null
  • Bit_score: null
GREAB_1 (db=PatternScan db_id=PS00829 from=16 to=47 evalue=0.0 interpro_id=IPR018151 interpro_description=Transcription elongation factor, GreA/GreB, conserved site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0

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Taxonomy

ACD1 → ACD1 → ACD1 → ACD1 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 456
CTATTTTACGCCTACAATCTTGTAAGTAATAACACCCTTTGGCGTTGTAACATCCACAGTGTCTCCAGCATCATGACCCATAAATGCTTTTCCAAGTGGAGATTCGTTTGAAATCTTGAAGTTTGCAGGATCCGCTTCGTTGGAGCCAACGATTGTAAATTCCATTTCGCTACCGTTAAAGCTAACTTTCACAATACTGCTCATCTGAGCTCCTTTCTGAGAATCATCTCTTTCAACAACCTGGGAATTTTTAATTACCATTTCAAGTTCGCCAATTCTTGATTCATTTTCATTTTGTTGTGATTTCGCTTCAGCGTATTCAGCATTTTCGCTCAAATCTCCCTGTTCTTTAGCCTCTTTAATTGCTTGCGCAATTTCTTGTCGTAGCCGCGTCTTTCGGTCTTCAAGCTCTGTGCGTAGCTTTTCCAGACCTTCTTTGGTGATGAATCGTACCAT
PROTEIN sequence
Length: 152
LFYAYNLVSNNTLWRCNIHSVSSIMTHKCFSKWRFV*NLEVCRIRFVGANDCKFHFATVKANFHNTAHLSSFLRIISFNNLGIFNYHFKFANS*FIFILL*FRFSVFSIFAQISLFFSLFNCLRNFLS*PRLSVFKLCA*LFQTFFGDESYH