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ACD1_56_40

Organism: ACD1

near complete RP 51 / 55 MC: 12 BSCG 49 / 51 MC: 2 ASCG 0 / 38
Location: comp(45213..45848)

Top 3 Functional Annotations

Value Algorithm Source
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 (db=KEGG evalue=5.0e-53 bit_score=210.0 identity=48.34 coverage=97.1698113207547) similarity KEGG
DB: KEGG
  • Identity: 48.34
  • Coverage: 97.17
  • Bit_score: 210
  • Evalue 5.00e-53
rpsD_bact: ribosomal protein S4 (db=HMMTigr db_id=TIGR01017 from=6 to=211 evalue=2.6e-69 interpro_id=IPR005709 interpro_description=Ribosomal protein S4, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.60e-69
Alpha-L RNA-binding motif (db=superfamily db_id=SSF55174 from=3 to=211 evalue=2.4e-57) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.40e-57

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Taxonomy

ACD1 → ACD1 → ACD1 → ACD1 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 636
TTATCTTGAATATGATTCAACAACCATCTGTGGGTCAACATGTACACCTATGTCTTCGCGAGTCGGGATAGCAATGATAGTAGCTTGATTTTTTGATGCATCAAATTGGATCCAACGAGGAAAATCTTTCTTATTTGCTAGAGCTTGAATCTGATTTGTGAAATAAGCGTTATCTTTCTTGTTTTCCTTGATACTAACAACATCTCCGACTTTCATTGCGCAAGATGGAATAGTCAATTTCTTTCCATTTACCAAGAAAGCTCCATGAGTCACAAGTTGTCTTGCTTGAATCGGTGAAGATGCAAAACCCATGCGGCGAACAACATTATCCAAACGCATTTCCAAACGTGACATAAGCAAGTCGCCGGTCACACCTGGCTTGTTTTGAATTTCTTCATAATGCTTGCGGAACTGCCTTTCAAGCACTCCATACATTCTTTTGATGCGTTGCTTCATTGCAAGTTGCTTTCCAAATTCGCTTAGTCCGCGGGAAATATTCTTTCCATGCACACCTGGAGCGTAAGGACGACGAGTAACTGCACATTTAGCGCTGTTACATTTGTCACCTTTAAGAAAAAGCTTTTCTTGAGCTCTGCGGCAACGCTTACACTTTGATCCTAATAAATCTCTAGCCAT
PROTEIN sequence
Length: 212
LS*I*FNNHLWVNMYTYVFASRDSNDSSLIF*CIKLDPTRKIFLIC*SLNLICEISVIFLVFLDTNNISDFHCARWNSQFLSIYQESSMSHKLSCLNR*RCKTHAANNIIQTHFQT*HKQVAGHTWLVLNFFIMLAELPFKHSIHSFDALLHCKLLSKFA*SAGNILSMHTWSVRTTSNCTFSAVTFVTFKKKLFLSSAATLTL*S**ISSH