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ACD1_56_38

Organism: ACD1

near complete RP 51 / 55 MC: 12 BSCG 49 / 51 MC: 2 ASCG 0 / 38
Location: comp(44178..44564)

Top 3 Functional Annotations

Value Algorithm Source
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 (db=KEGG evalue=1.0e-35 bit_score=151.0 identity=62.6 coverage=93.7984496124031) similarity KEGG
DB: KEGG
  • Identity: 62.6
  • Coverage: 93.8
  • Bit_score: 151
  • Evalue 1.00e-35
RIBOSOMAL_S13_1 (db=PatternScan db_id=PS00646 from=88 to=101 evalue=0.0 interpro_id=IPR018269 interpro_description=Ribosomal protein S13, conserved site GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0
bact_S13: 30S ribosomal protein S13 (db=HMMTigr db_id=TIGR03631 from=3 to=115 evalue=4.8e-67 interpro_id=IPR019980 interpro_description=Ribosomal protein S13, bacterial-type GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 4.80e-67

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Taxonomy

ACD1 → ACD1 → ACD1 → ACD1 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 387
CTAGGTCTTAGATTCGCTGCGACGACCGCTTCCCATAGTTCTACGAACATTTCCACGAACTGTTCGACTGTTTGTCTTTGTTCGTTGACCGTTAACAGGCAAACCTTTTTGGTGCCTGGAGCCTCTATAGCTACCGATTTCTTTAAGGCGCTTGATGTTCATTTTTACTTCATGATGCAGTTCTCCTTCTACCTTATACTTCTTTTCAATTTCATCACGAAGCTTGTTTGCATCCTCGGCTGACAATTCCTTAGTACGAGTATTCGCATCAATATCCAATTGCTTTAAAAGTTTGCGACTTGTTGAAGGTCCAATACCATAAACGTAAGTCAAAGCGATTTCAATTCTTTTTTCGTCAGGAAGGTTAATTCCGGCAATTCTTATCAT
PROTEIN sequence
Length: 129
LGLRFAATTASHSSTNISTNCSTVCLCSLTVNRQTFLVPGASIATDFFKALDVHFYFMMQFSFYLILLFNFITKLVCILG*QFLSTSIRINIQLL*KFATC*RSNTINVSQSDFNSFFVRKVNSGNSYH