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ACD1_58_45

Organism: ACD1

near complete RP 51 / 55 MC: 12 BSCG 49 / 51 MC: 2 ASCG 0 / 38
Location: comp(39592..40140)

Top 3 Functional Annotations

Value Algorithm Source
putative dTDP-4-dehydrorhamnose 3,5-epimerase similarity KEGG
DB: KEGG
  • Identity: 59.3
  • Coverage: 182.0
  • Bit_score: 223
  • Evalue 6.20e-56
DTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Geobacillus stearothermophilus RepID=Q6WNH8_BACST (db=UNIREF evalue=2.0e-54 bit_score=214.0 identity=55.93 coverage=95.6284153005464) similarity UNIREF
DB: UNIREF
  • Identity: 55.93
  • Coverage: 95.63
  • Bit_score: 214
  • Evalue 2.00e-54
rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase (db=HMMTigr db_id=TIGR01221 from=2 to=179 evalue=4.4e-78 interpro_id=IPR000888 interpro_description=dTDP-4-dehydrorhamnose 3,5-epimerase related GO=Molecular Function: dTDP-4-dehydrorhamnose 3,5-epimerase activity (GO:0008830), Biological Process: lipopolysaccharide biosynthetic process (GO:0009103)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 4.40e-78

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Taxonomy

GWC1_OD1_38_22 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 549
ATGGAAATAAAAGAAACAGGACTATTGGGTGCATATTTGCTGACCCCTAAAGTTTTTCGAGATGAAAGAGGCTTCTTTACGGAGACTTATTCTAAAAAGAAATTAGCAGATGGTGGTATAATTTGTCAGGAGTGGGTGCAGGATAATCATTCCATGTCTACCAAGAAAGGTGTGCTACGGGGATTGCATTTTCAAAAAGCTCCATTCACGCAGGCAAAACTCGTGCGTGTGACAAAGGGTTCGGTATTTGATGTAATTGTTGATATTCGTAAAGATTCTCCTACATATGGAAAATGGGAAGGCTTTACATTATCTAGTGAAAATTTTCAGATGTTATTTGTGCCAAGAGGATTCGCTCATGGATTTGTAACTCTTGAAGATAACACGGAATTTCAATACAAATGCGACAATTATTATGCGCCGGAGACTGAAGATGCTATCAGCTGGAACGACCAGACGCTTAACATAAATTGGCCAGTTGAAAACCCGATTCTTTCAGAAAAAGATGCGAAAGCGCAATTATTTAGAGATTTTAAGTCACCATTTTAA
PROTEIN sequence
Length: 183
MEIKETGLLGAYLLTPKVFRDERGFFTETYSKKKLADGGIICQEWVQDNHSMSTKKGVLRGLHFQKAPFTQAKLVRVTKGSVFDVIVDIRKDSPTYGKWEGFTLSSENFQMLFVPRGFAHGFVTLEDNTEFQYKCDNYYAPETEDAISWNDQTLNINWPVENPILSEKDAKAQLFRDFKSPF*