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ACD20_16_10

Organism: ACD20

near complete RP 51 / 55 MC: 13 BSCG 50 / 51 MC: 4 ASCG 0 / 38
Location: 9804..10706

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 48.9
  • Coverage: 262.0
  • Bit_score: 228
  • Evalue 2.40e-57
seg (db=Seg db_id=seg from=217 to=231) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null
TruB: tRNA pseudouridine synthase B (db=HMMTigr db_id=TIGR00431 from=6 to=219 evalue=1.2e-92 interpro_id=IPR014780 interpro_description=Pseudouridine synthase II, TruB, N-terminal, bacterial-type GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.20e-92

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 903
TTGGTTTCAAACAATCTATTCGGAATAATAAATGTTAATAAGCCAATAAGATTTACCTCACATGATGTTGTAGGCAAACTTAGAAAAATATTGAATATGAAACAGATAGGTCATACAGGAACCCTTGACCCGTTAGCGGTTGGGGTTCTTCCTGTATGTATAGGTAAGGCAACAAAAATCATTCAATACCTTGAAGAATCAAAGGCTTACAGGGCTTATATAAAGCTGGGAATTAAAACAGACACTTATGATGCCGATGGTGAAGTTATAGAAGATAACCCTGTTAATCTTGATATTTCTGACATCGAATCAAGGTTAAGTAGATTTAAAGGAGAAATAATACAAAAACCCCCCATATATTCAGCAGTTCATTATAAAGGTAAAAGATTATACGAATATGCAAGGGCGAATATCGAGATAGAAGATATTCCTGAGCGTAAGGTTTATATCAATTCCATAGAGTTGTTGGATATATTAGATAAAGATTCTGATCATCCGGTGCTTATTGTAGACATTGATTGCTCAGGCGGTACCTATATTAGGTCTATAGCTTATGATTTAGGAGAAGCGCTTGGTTATGGAGCAAGCTTGAACTCATTAATCAGGACAAAATCAGGAAAATTTACAATAGACAAAAGCCATACTCTTGAAGAAATTGAAGAATTTTCCAGATCAAGCAGGATAAATGAAATTTTGATTAATCCAATTGATGTAATTAATTTAAGACATGTTTATGTAACTGAAAATGAGATAAACAAGCTTTCAAAAGGACAATATATTAAAATTTGTGATGAAAATAATTGGACTAATATAGAAAAAATTCAGCTTATATACGAAAATAAATTAATTGCGATTGCCAGAGTTGAAGAAGACAAAGCTTTTCCTATAAACGTTTTTGTCTAA
PROTEIN sequence
Length: 301
LVSNNLFGIINVNKPIRFTSHDVVGKLRKILNMKQIGHTGTLDPLAVGVLPVCIGKATKIIQYLEESKAYRAYIKLGIKTDTYDADGEVIEDNPVNLDISDIESRLSRFKGEIIQKPPIYSAVHYKGKRLYEYARANIEIEDIPERKVYINSIELLDILDKDSDHPVLIVDIDCSGGTYIRSIAYDLGEALGYGASLNSLIRTKSGKFTIDKSHTLEEIEEFSRSSRINEILINPIDVINLRHVYVTENEINKLSKGQYIKICDENNWTNIEKIQLIYENKLIAIARVEEDKAFPINVFV*