ggKbase home page

ACD20_26_27

Organism: ACD20

near complete RP 51 / 55 MC: 13 BSCG 50 / 51 MC: 4 ASCG 0 / 38
Location: comp(32887..33447)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 26.4
  • Coverage: 178.0
  • Bit_score: 71
  • Evalue 4.00e-10
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null
DUF1239 (db=HMMPfam db_id=PF06835 from=21 to=172 evalue=4.0e-09 interpro_id=IPR010664 interpro_description=Lipopolysccharide-assembly, LptC-related) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 4.00e-09

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 561
ATGTCAAGAAAATCAATAATTCTAACAGTTGCAATAGGGGTTTTAGCTATATTGGGCATTTTGGCGTTTAATATATCCTCAAACATAACACGTGATCTGAATCTTTTAACTGATGAATCTAACGATGGCCAAAGAGCCAATATTGAAGAACTTGTTATTACAGAGACAAGAGATGGGCAGAAGCATTGGGAAGTATACGCAAACTCAGCTCAATACGATAACAGCAAAAATATGGCTGTATTAACCGATGTAAAAGGTAATTTTTATAAAGAAGGTAAGGTCGTCTTAAGCTTTGATGCACCAGTAGCTACTTACAATGCTAAGATTAAAGAAATAATACTAACAGGCGGTTCCCGAGCTGCTACTGATAATGATATCCTCATTACAGCTGAAGAAATTTCCTGGACCGGCAGTAAAGATGAAATTACAGCCAAAAAGAATGTTAAAATCAGAAGAGCTGATGAGTTATATGTCACCAGCGATGAATCTTCCTTTAATACTGATTTTACAAAATTAAAGCTCAGAGGAAATTCTCTGGCTAACGTGTACAAGAAAAATTAA
PROTEIN sequence
Length: 187
MSRKSIILTVAIGVLAILGILAFNISSNITRDLNLLTDESNDGQRANIEELVITETRDGQKHWEVYANSAQYDNSKNMAVLTDVKGNFYKEGKVVLSFDAPVATYNAKIKEIILTGGSRAATDNDILITAEEISWTGSKDEITAKKNVKIRRADELYVTSDESSFNTDFTKLKLRGNSLANVYKKN*