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ACD20_27_17

Organism: ACD20

near complete RP 51 / 55 MC: 13 BSCG 50 / 51 MC: 4 ASCG 0 / 38
Location: 17210..18091

Top 3 Functional Annotations

Value Algorithm Source
transmembrane_regions (db=TMHMM db_id=tmhmm from=246 to=268) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null
transmembrane_regions (db=TMHMM db_id=tmhmm from=209 to=231) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null
transmembrane_regions (db=TMHMM db_id=tmhmm from=177 to=196) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null

Lists

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Notes

8 helices found. membrane bound kelly wrighton (11/15/12)

Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 882
ATGAAATATATCCTTAAGAAGCCTATATTAGTGGCATTGATACTGTCATTAGTCTCTTACTGTGTGTATATAACAATTTCAAATCTGGCTTTAATATATTTAGAAATACTGAGCATATCTCTGATCGGTTTTATTTATGTTTATGAATTTAGAGAGCCGATGCCTAGAGATTTAAGGTTAAATATTTCATTCTATTTTGTTGTTTTTTCAATAATTATATACTTTACCAGCGACACTTATGATTTATTGAGACAGGTAAATATGCCTGTATTTTCTGTTACACCTGCGTTTTCATTCTTTTTAGGGGCTTTGCTTATAAAAGAATTGATAAAAAGTCCTCTTTTATTTGGATTAACATATATTTTTCTATATGTTGCAGGCAGAATATATCTTCATTTAAATAAATATTCCATTAAGATGATAGATAAGCGTGTTTTGCAGGAGCCTTTTATTCTTGCAATATTATTATCTGCATTATATATGCTGGTAGTCCCGGTAGAAAGTTATGCTATTCAAGATTTATATAAGCTTGTTCTCTTTGAAATATCAATAGTATTTGTTATTGGAGTGATTTATACCTTAAGATTCAGACAGGTAATACCTAATAAGCTAAAGTTAGAAACAGCAACATATTTTTCTGTTATTACATTCGTAATTTATTTTTTGAGTCATACTCATAATTATTATATGAGCCTTGGTAGTGATATGTTGGCTGGAAAACAGGATTTATTATCTTTACCTGTATTTATAAGTTTATTTGTGAAAAATCTATATTTGGATACCTATATAGCAGTGACATTCTTAAGGTTTGCTTCAGCTTATACTTTCCTTGATTTGCCCGGTAGAATGTTGCTCTATCTGAAGAAGGAAAAAACCGTATAG
PROTEIN sequence
Length: 294
MKYILKKPILVALILSLVSYCVYITISNLALIYLEILSISLIGFIYVYEFREPMPRDLRLNISFYFVVFSIIIYFTSDTYDLLRQVNMPVFSVTPAFSFFLGALLIKELIKSPLLFGLTYIFLYVAGRIYLHLNKYSIKMIDKRVLQEPFILAILLSALYMLVVPVESYAIQDLYKLVLFEISIVFVIGVIYTLRFRQVIPNKLKLETATYFSVITFVIYFLSHTHNYYMSLGSDMLAGKQDLLSLPVFISLFVKNLYLDTYIAVTFLRFASAYTFLDLPGRMLLYLKKEKTV*