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ACD20_183_2

Organism: ACD20

near complete RP 51 / 55 MC: 13 BSCG 50 / 51 MC: 4 ASCG 0 / 38
Location: 2161..2859

Top 3 Functional Annotations

Value Algorithm Source
truB; tRNA pseudouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 50.4
  • Coverage: 230.0
  • Bit_score: 223
  • Evalue 6.10e-56
seg (db=Seg db_id=seg from=141 to=152) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null
TruB: tRNA pseudouridine synthase B (db=HMMTigr db_id=TIGR00431 from=5 to=220 evalue=1.3e-68 interpro_id=IPR014780 interpro_description=Pseudouridine synthase II, TruB, N-terminal, bacterial-type GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.30e-68

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Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 699
ATGATGAATGAAACATCCGGAATATTGTTAGTTAACAAATCTAAAAACAAATCTTCCTTTAGCATAGTACATCTTCTAAGGAAGCTAACTAAAATAAAAAAGATAGGTCATGCGGGAACATTAGATCCATTTGCAACAGGTTTAATGATTATGCTGATCGGAAAAAAATACACGATACAATCATCTTTATTTTTAAATCAGGAAAAACAGTATCACTGCAAAATACATCTAGGATTCGTAACCAAATCATTTGATCCTGAAGAAAACCTTGAATTTTTTTCTGACAAAATCCCCTCACTTGAAGAAGTACAGAATGCAGCAGCTGAATTTCAGGGAACAATTGACCAAATACCTCCTATGTTCAGCGCTAAAAAAATAAATGGGCAAAAGCTGTATCATTTAGCAAGAAGAGATATAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGTTCAGGTAAATGTTCACACAAAATTAATATCTTATGAATATCCCTATTTAGAGCTGGATATTACTTGTTCCAAGGGAACATATATCAGATCGATTGCAAACGATCTTGGAGTGAAGCTAAAAACAGGAGCTTATCTCCATACACTAACGAGAACAAGGTGCGGCAGGTTTTTTCTAAAAAGTGCTATTGATCAAGACCTTTTAGATGAAAGCACTAACTTTCAAACCCTTCTCTTAAAATGA
PROTEIN sequence
Length: 233
MMNETSGILLVNKSKNKSSFSIVHLLRKLTKIKKIGHAGTLDPFATGLMIMLIGKKYTIQSSLFLNQEKQYHCKIHLGFVTKSFDPEENLEFFSDKIPSLEEVQNAAAEFQGTIDQIPPMFSAKKINGQKLYHLARRDIXXXXXXXXXXXXXVQVNVHTKLISYEYPYLELDITCSKGTYIRSIANDLGVKLKTGAYLHTLTRTRCGRFFLKSAIDQDLLDESTNFQTLLLK*