ggKbase home page

ACD22_38_3

Organism: ACD22

partial RP 35 / 55 MC: 6 BSCG 37 / 51 MC: 3 ASCG 0 / 38
Location: comp(1991..2728)

Top 3 Functional Annotations

Value Algorithm Source
RNA-directed DNA polymerase (Reverse transcriptase) similarity KEGG
DB: KEGG
  • Identity: 32.0
  • Coverage: 250.0
  • Bit_score: 124
  • Evalue 3.10e-26
RVT_1 (db=HMMPfam db_id=PF00078 from=66 to=239 evalue=5.6e-24 interpro_id=IPR000477 interpro_description=RNA-directed DNA polymerase (reverse transcriptase) GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: RNA-directed DNA polymerase activity (GO:0003964), Biological Process: RNA-dependent DNA replication (GO:0006278)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 5.60e-24
DNA/RNA polymerases (db=superfamily db_id=SSF56672 from=9 to=235 evalue=1.6e-18) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.60e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 738
ATGGTAAACCAAAAGCTGTTGAACAAAGCCTTTAAAATACTTAGAAGAAATTACGGCTGCCCTGGGTTGGACGGCATATCGATTAAAGAGATAAAACATAGCTACAAACATCACCTCAAAGCTATCTCGTCAAAAATAACCCGGGGTGAAATAAACACATTACCAGTCAAGATAGTTCCAATTACCGACTATAGGGGAAATACCCGAAACGTTTTCGTTTATTGCGTGTATGAAAGATGGATTCAAGCTTACTTAAAACTACAAATCGAGCCAATGGTTGAAAAATTAATGTACCCATATGTTTACGGCTACAGGAGAGGACTGGACGGGAATATGTTAAATGCCTATATTACCAAAAACAAAATGAAAAGAGTTCTGCACATAGATATTGAAAAATTCTTCGATAACATAGACACCAACATTCTCTGTAGGAACCTATCTGAAGAAATGTACATCAATAAGGCCTTGTTAATTGCGATTCAGAAAACAATATGGGCTGGGGTGGGTTTACCTCAAGGTAACGTTCTTTCACCCATACTATCAAATCTCTATTTGAACAACCTAGATCAGCATTTTCCTACAAACTATGCTAGATTTAGTGATGATATGTATTTTGCTTTTACCGATCCTAAATGCATAAACCCTCTCGTATCCAAAGTAACAGCTGTATTATCTAAACTTAATCTAACAATAAATTTTAAGAAGGTAGAAATACTTGATGCCAAAAAAATGCAATGA
PROTEIN sequence
Length: 246
MVNQKLLNKAFKILRRNYGCPGLDGISIKEIKHSYKHHLKAISSKITRGEINTLPVKIVPITDYRGNTRNVFVYCVYERWIQAYLKLQIEPMVEKLMYPYVYGYRRGLDGNMLNAYITKNKMKRVLHIDIEKFFDNIDTNILCRNLSEEMYINKALLIAIQKTIWAGVGLPQGNVLSPILSNLYLNNLDQHFPTNYARFSDDMYFAFTDPKCINPLVSKVTAVLSKLNLTINFKKVEILDAKKMQ*