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ACD24_17_4

Organism: ACD24

partial RP 42 / 55 MC: 13 BSCG 35 / 51 MC: 9 ASCG 0 / 38
Location: 3663..4151

Top 3 Functional Annotations

Value Algorithm Source
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null
Pili subunits (db=superfamily db_id=SSF54523 from=24 to=149 evalue=7.0e-10) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 7.00e-10
IV_pilin_GFxxxE: prepilin-type N-term (db=HMMTigr db_id=TIGR02532 from=21 to=44 evalue=2.2e-05 interpro_id=IPR012902 interpro_description=Prepilin-type cleavage/methylation, N-terminal) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.20e-05

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Taxonomy

RBG_16_WWE3_37_10_curated → WWE3 → Bacteria

Sequences

DNA sequence
Length: 489
ATGATGGTAAAAGTGGATGGGTGTTTAAAGAATATGTCGAAATTATCAAAACGCAATAAAACTTCTGGTTTTACTTTACTGGAAGTTCTTCTTTCCATTGCTGTAATAGGGCTTATTGCCGGAATCGGAACCCCTATTTATTTATCTTTGCAGACTAGAAACGATTTATATATTGCCGAAAATAGTACAGTTCATTCGTTGCGCCATGCTCAATTACTCTCCCAAATTGTTGATGGTGACAGTTCATGGGGTATTTATTTGCAAAACGGAAGTGTCACCATTTTTAGAGGATTAAATTATTCAAGTAGAAACACAGATTTTGATAAAATAATTATTCTGCCGGGAAATATAACTACATCAGGTGTTTCAGAAATTATTTACGAAAAGTTCACCGGAATCCCACTGGCTACCGGGACAATTACTCTTACCTCCAATGCAAATGAAATTAAAAACATCACAGTTAATTCAAAAGGAATGGTCGGATATTAG
PROTEIN sequence
Length: 163
MMVKVDGCLKNMSKLSKRNKTSGFTLLEVLLSIAVIGLIAGIGTPIYLSLQTRNDLYIAENSTVHSLRHAQLLSQIVDGDSSWGIYLQNGSVTIFRGLNYSSRNTDFDKIIILPGNITTSGVSEIIYEKFTGIPLATGTITLTSNANEIKNITVNSKGMVGY*