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ACD11_6_217

Organism: ACD11

near complete RP 50 / 55 MC: 11 BSCG 47 / 51 MC: 2 ASCG 0 / 38
Location: comp(232550..233125)

Top 3 Functional Annotations

Value Algorithm Source
seg (db=Seg db_id=seg from=17 to=28) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null
seg (db=Seg db_id=seg from=101 to=111) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null
PaaX_C (db=HMMPfam db_id=PF08223 from=106 to=177 evalue=1.3e-09 interpro_id=IPR013225 interpro_description=PaaX-like, C-terminal) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.30e-09

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Notes

PaaX, but also possibly cas2: CRISPR-associated endoribonuclease Cas2 Jill Banfield (11/14/12)

Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 576
ATGTGGTATAATTGTGATATGTATAAATTTGGATCGGTGCAAAAAAAGATTATAATTGGACTCTTGGGAGGCATAGCCTTGGGCATGTCGTCTTCGCCGAGGCAATATTTCAAAGCATTTCGTCAAATACAAAAAGATTGGAAAAAAATAAATCAAGATAGTTTCAACCGATCAATCAAAAGACTTTCACGAGAAAAACTAGTGGAAGAAAAGAAGTTATCAGACGGCTCTTTTAAATTGATTCTCACTAGGGAAGGGAAAGAGCAAGCGAGAAAACTAAGCTTAATTGGCAATTTTATAAAGTTTAAAAAGCCTAAAAAATGGGACAAAAAATGGAGAATTGTGATTTTTGATATTCCTGAAAAAGATAAAGTTTTTCGCAATATATTGCGAGAGCATCTCAAGGAGCTTAATTTTTTTAAGCTTCAAAATAGTGTATTTATTTCTCCGCATCCCTTTGAAGAAATGATTTCTGAGCTCACTAGGCTATATTCTTCTGAACAATATGTTAGAATAATCACAGCAATAAAAATTGATGATGAGTATAAAATTAAGAAACATTTCTTGATTAAATAA
PROTEIN sequence
Length: 192
MWYNCDMYKFGSVQKKIIIGLLGGIALGMSSSPRQYFKAFRQIQKDWKKINQDSFNRSIKRLSREKLVEEKKLSDGSFKLILTREGKEQARKLSLIGNFIKFKKPKKWDKKWRIVIFDIPEKDKVFRNILREHLKELNFFKLQNSVFISPHPFEEMISELTRLYSSEQYVRIITAIKIDDEYKIKKHFLIK*