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ACD32_61_11

Organism: ACD32

partial RP 4 / 55 MC: 1 BSCG 4 / 51 ASCG 0 / 38
Location: comp(6415..7815)

Top 3 Functional Annotations

Value Algorithm Source
rpoD; RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 27.6
  • Coverage: 330.0
  • Bit_score: 90
  • Evalue 1.60e-15
seg (db=Seg db_id=seg from=3 to=15) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null
SIGMA70_2 (db=PatternScan db_id=PS00716 from=161 to=187 evalue=0.0 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 1401
ATGATGAAGAAAAAAACCCCTAAAAAGTCTCCAACGACGTCTACGATTTCCATCTTATTAGATAATTCAGGATCAAATTTTAATCCTCATCTCAAATACGACCAGCTTCAGAAATTAAATGTACCTATGAGATTCTCAAGGAATCAGTCTATTGGCGTATTGGGTTTACCTGTAAGACTTGAGAATGCTCTAAAAATGGCTGATATATACAGATTGGGTGAATTATTCGATTATCCGGAAAAAAAACTTTATAGAATTAAAAATATAGGTGCAAAATCTGTAAATCTGTTATTAGCATACAGGAAAAATTTGATATTTGGTGTTGATTCCAGTGAGGTTTCTCAAAATTCAAAAATAGAAGTAAAAACCATCACGCTATCCCCCGATGAATTGATTGACGATCTAATGAAACGTTGTGGAGATTACAGAAATATTGAAGTTATTCAAAGGAGGTACGGGTTGCTAAACGGAGAAAAAGAAACCTTAGAAGAAATTGGAGAAAGTTACGGAATCACAAGAGAGAGGGTAAGACAACTTCAAAAAAAGGCTATAAAAAAATTACGGCACCCATCAACTTTATCCAGAAAACCAATTATTGATTTACTTGACGAACTCTTTCTTAAGAATGATCTAGTAATTTCGGATGAGGAAGCTGATAGGATAATTCCCAAGATTTTCAAGAAACTACCATACGACGGTAGTTCTTTATTGGATTTATTTGCGGATTTAGCGTGGATACAAAAACATCGGGTAGGTGATGTATTTTTTTATTCCACAATCAAAATCTCCCAAAGAATAAAATTATCTATATTAATGGAAGATATAGTTCAAATATTAAGAAAAAGTAGTTTACAACTTGATTTGAACGAGATACTGACTAATTTATCTTTAAAACAAAGTGATGAATATAAAATTTTATCTAATATCGTACTTAAGTGTTGTAAATTAGATCCTCGAATCGAAGACAAAACCAACGGTAAGTTCGCTCTTTACGGAAATAGTAGAATATTCGGCAAATGGGTTCCTTTAATAAATAAGGTATTAACTGATGAAGGAGAACCATTACATTTTACAGAAATATCTGAAAGGGTAAACGATTTATTAATTTCCCAGGATGTTCACCTCGATCAACGTAGAGCCCATTCAATACTTATTGAGAATCCGGCTTTTGCACATACCGGTATTAAAGGAACATATGGTTTAACTGAGTGGGGAATAAGAAAAGAGTCAACGCTTGAACTTGTAAAAGAATACATCACTAACGCAGGATTTCCGATTCATTGGGAACAAATTTATCATTATGTGAGTAAATATAAATATACCAGTGAAGCAACATTGAGAGCTTTACTTTATTCTAAATTTGAGAACGCCGGTAATGGTTTATATTGGATCAAGGAATAA
PROTEIN sequence
Length: 467
MMKKKTPKKSPTTSTISILLDNSGSNFNPHLKYDQLQKLNVPMRFSRNQSIGVLGLPVRLENALKMADIYRLGELFDYPEKKLYRIKNIGAKSVNLLLAYRKNLIFGVDSSEVSQNSKIEVKTITLSPDELIDDLMKRCGDYRNIEVIQRRYGLLNGEKETLEEIGESYGITRERVRQLQKKAIKKLRHPSTLSRKPIIDLLDELFLKNDLVISDEEADRIIPKIFKKLPYDGSSLLDLFADLAWIQKHRVGDVFFYSTIKISQRIKLSILMEDIVQILRKSSLQLDLNEILTNLSLKQSDEYKILSNIVLKCCKLDPRIEDKTNGKFALYGNSRIFGKWVPLINKVLTDEGEPLHFTEISERVNDLLISQDVHLDQRRAHSILIENPAFAHTGIKGTYGLTEWGIRKESTLELVKEYITNAGFPIHWEQIYHYVSKYKYTSEATLRALLYSKFENAGNGLYWIKE*