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ACD12_202_1

Organism: ACD12

megabin RP 52 / 55 MC: 37 BSCG 46 / 51 MC: 26 ASCG 0 / 38
Location: 3..482

Top 3 Functional Annotations

Value Algorithm Source
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 31.3
  • Coverage: 182.0
  • Bit_score: 81
  • Evalue 1.90e-13
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=11 to=156 evalue=3.7e-29 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 3.70e-29
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=5 to=79 evalue=8.3e-17 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 8.30e-17

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 480
ATAATTAGAAAAATTAAGAACGGTCAAATTGATAACTATTCTTATATAGTAAAAAAATATACAACCTTAATATATAGATTTATTCAAAGGAAGCTTTTTAATAAAGAAGATGTCGATGATCTGGTTCAAAATGTTTTTATTTCTTTTTATAAGGCGATTGAAAAATTTGATGAAAAAAAACCAATTAAGCCATATTTATTTCAAATCGTTCAAAACGAATTAAAGATGCATTATAGATTGAAAAAACCAACTACATCATTAAACGATAATACTTATCTTATAGACGATCGTTCACAAGATAATAATATTGATGATTATTTGAGCCATCTTAATCAGGAAGAAAGAAACATTTTTCAACATATCAGCAAAGGTTATTCATATGAAGATATTGGAAAACTATTCAAAAAACCTGTAAATACGATAAAATCAATTGTAAGAAGAGGGCGATTAAAATTAAAAAGTATCTATGAAAAAACTTGA
PROTEIN sequence
Length: 160
IIRKIKNGQIDNYSYIVKKYTTLIYRFIQRKLFNKEDVDDLVQNVFISFYKAIEKFDEKKPIKPYLFQIVQNELKMHYRLKKPTTSLNDNTYLIDDRSQDNNIDDYLSHLNQEERNIFQHISKGYSYEDIGKLFKKPVNTIKSIVRRGRLKLKSIYEKT*