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ACD38_4_8

Organism: ACD38

near complete RP 48 / 55 MC: 11 BSCG 45 / 51 MC: 4 ASCG 0 / 38
Location: 4846..5382

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ecf subfamily similarity KEGG
DB: KEGG
  • Identity: 36.7
  • Coverage: 169.0
  • Bit_score: 118
  • Evalue 2.10e-24
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=18 to=175 evalue=1.9e-48 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.90e-48
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=2 to=111 evalue=1.0e-24 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.00e-24

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Taxonomy

GWA2_OP11_ACD38-rel_39_33 → Daviesbacteria → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 537
ATGGAAACGGAAATTTTATACCTTGTTAGACAGTCTAAAAAAGGAAGAAAGGAGGCGTTCGGGAAACTTTATACTTTATATCTAAAAAAAGTATACAGGTTCATTTATTATATGGTATATGATACTGCTGTTGCTCAGGATTTGACCCAGGATACCTTTTTTAAGGTATGGAGGTCTATATCCGGCTTTCGGGAAGATAAGGGTACTTTTTCCGGGTATTTGTTTGCAATTGCCAGAAATGTGGTAATTGATTACAGCCGGAAGAAAAAAGAATCAAGAATTGGTCCTGAAATGGAGGATAACATTGCCTCGAGCGAAGATATTGAAGAGCAATTAGTTGCAGAAGAAAATAGGAAAGACGTACAAAATTCTTTGCAAAAATTGGATGGTGACAGCCGACAGCTGATTATCTTCCGCTATTTTGAGGAACTGTCGATATCGCAAATAGGCGAGGTTTTGGGGAAAAAAGATGGAAATGTGCGGGTTTTAATATTTCGGGCTCTTAAGAAATTAAAAAAAATTATGGGAGGAAAATAA
PROTEIN sequence
Length: 179
METEILYLVRQSKKGRKEAFGKLYTLYLKKVYRFIYYMVYDTAVAQDLTQDTFFKVWRSISGFREDKGTFSGYLFAIARNVVIDYSRKKKESRIGPEMEDNIASSEDIEEQLVAEENRKDVQNSLQKLDGDSRQLIIFRYFEELSISQIGEVLGKKDGNVRVLIFRALKKLKKIMGGK*