ggKbase home page

ACD40_35_2

Organism: ACD40

partial RP 43 / 55 MC: 9 BSCG 39 / 51 MC: 3 ASCG 0 / 38
Location: comp(359..829)

Top 3 Functional Annotations

Value Algorithm Source
greA; Transcription elongation factor greA similarity KEGG
DB: KEGG
  • Identity: 39.4
  • Coverage: 155.0
  • Bit_score: 94
  • Evalue 2.90e-17
GREAB_2 (db=PatternScan db_id=PS00830 from=121 to=137 evalue=0.0 interpro_id=IPR018151 interpro_description=Transcription elongation factor, GreA/GreB, conserved site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0
GreA_GreB (db=HMMPfam db_id=PF01272 from=85 to=156 evalue=3.0e-20 interpro_id=IPR001437 interpro_description=Transcription elongation factor, GreA/GreB, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 3.00e-20

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 471
ATGGGCATGACGAAACAACCTGATCCTGTGCCGTTTACCCGAGCCGGATACGAACAACTAAAGATCAAGCAGACAGAGCTGTTGGCTAAGCGCGAGGTGGTACTGATCGCGTTACAGCGGGCGCGCGAGATGGGAGATTTGTCAGAGAACGGCGCATATACTGCGGCTAGGTTTGAGCTGGGGAACACGGACCGGGAGCTGCGCCGACTCCCGTTTATGCTCAAGTATGGCGTGATCACCGAGGCTAAAGGCACAGACAGAGTGGGATTCGGGAACCGGGTAACGGTCGAGCTCAATGGGGCTGAATTTACGTATTTGCTGGTGGGGACTCAAGAATCTGATCCTAAACTTAAAATGATCTCACTCGAATCGCCGATTGGGATTGCGTTACTGGGTAAGTCCGTGGGTGAGAAAGCTATCGTCACCATGAGCGATCGGATGATTGAGTATGTAATTAAAAAAATTGAGTAG
PROTEIN sequence
Length: 157
MGMTKQPDPVPFTRAGYEQLKIKQTELLAKREVVLIALQRAREMGDLSENGAYTAARFELGNTDRELRRLPFMLKYGVITEAKGTDRVGFGNRVTVELNGAEFTYLLVGTQESDPKLKMISLESPIGIALLGKSVGEKAIVTMSDRMIEYVIKKIE*