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ACD41_82_3

Organism: ACD41

megabin RP 44 / 55 MC: 20 BSCG 41 / 51 MC: 16 ASCG 0 / 38
Location: 1864..2862

Top 3 Functional Annotations

Value Algorithm Source
thrombospondin type 3 repeat family protein similarity KEGG
DB: KEGG
  • Identity: 40.6
  • Coverage: 244.0
  • Bit_score: 124
  • Evalue 4.20e-26
Blue (Type 1) copper domain protein n=1 Tax=Frankia sp. EUN1f RepID=D3CW41_9ACTO (db=UNIREF evalue=3.0e-11 bit_score=73.2 identity=45.78 coverage=24.6246246246246) similarity UNIREF
DB: UNIREF
  • Identity: 45.78
  • Coverage: 24.62
  • Bit_score: 73
  • Evalue 3.00e-11
seg (db=Seg db_id=seg from=109 to=128) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null

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Notes

Cindy has a lot of information on this! Has cupredoxin fold, Cu-binding site, and and Ca-binding EF-hand loop. Jill Banfield (11/15/12)

Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 999
ATGACCCAATATCTGACACAACACTGGAGGCTAACCTTAGCCACAATTATTCTTACTCTGGTTGCAATTATTGCCATTCAACCCATAGTGGCGCATGAGGAAGAAGATCACGATGAAGACGGTATTTTTGATTCGGTTGACGTTGATACAGATGGTGATACCTATCCCGATTGTGCAGAGAAAGGCAAGTACCGAGATGATAGCGATAATGATGGTATCGACGATGATGAAGACGATAGTGTTGATGATCCGCAAAGCACAGTCGATAGAGATGCCGACGGTATTCCCGACTACATTGAAAAAGGTAAATTCCGCAAGAATCACGACAACGACGGCAATGATGACGTCGCAGATTTAGATGATGATAATGATGGCGCGGCCGATAAATCGGAAGATGCGGCCGATAAGTTAAATCATGATGACGATGCCAAGAAAGATAAGAAAGATGCCGATGACGATGATGACGGCATCAAAGATTTTAACGAGTCCGATTGCGAGGCGATGCATGATCATGATAATGATGATGAAGCCGACAAACATGATGACGATGATGACGATGATGGCATAACGGATGATGAAGATGAGGATTCACACGATCACGACAATGACGGAGAAGCTGACAAACATGACGATGATGACGATGATGACGGTCTCGATGATGACGATGATGATATGAAACACGACAGCGATAACGACGGCATCGATGATAAAGACGATACCGACGATGATTCCGATGATGCTGAGCCAGTAACCTATGACGTTTCGATTGAAGATTTCTTTTTTAGTCCAGATGACATTACCATCCAAGTGGGTGATTCAATCACCTTTACCAACAATGGCAGCACTACCCATAACGTTTCAGAAGAAAACTTCGTATTTAATACCGGTCCATTGAGTGCGGGTGAATCAGGAACGATTACCTTCGATACCGCCGGAACATTTAACTACCTCTGTGCTTTCCACAACAGTATGACCGGCACAGTAAAAGTGGAAGAATAA
PROTEIN sequence
Length: 333
MTQYLTQHWRLTLATIILTLVAIIAIQPIVAHEEEDHDEDGIFDSVDVDTDGDTYPDCAEKGKYRDDSDNDGIDDDEDDSVDDPQSTVDRDADGIPDYIEKGKFRKNHDNDGNDDVADLDDDNDGAADKSEDAADKLNHDDDAKKDKKDADDDDDGIKDFNESDCEAMHDHDNDDEADKHDDDDDDDGITDDEDEDSHDHDNDGEADKHDDDDDDDGLDDDDDDMKHDSDNDGIDDKDDTDDDSDDAEPVTYDVSIEDFFFSPDDITIQVGDSITFTNNGSTTHNVSEENFVFNTGPLSAGESGTITFDTAGTFNYLCAFHNSMTGTVKVEE*