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ACD15_46_13

Organism: ACD15

near complete RP 50 / 55 MC: 14 BSCG 47 / 51 MC: 5 ASCG 0 / 38
Location: comp(14588..15397)

Top 3 Functional Annotations

Value Algorithm Source
ksgA; dimethyladenosine transferase (EC:2.1.1.-) similarity KEGG
DB: KEGG
  • Identity: 45.0
  • Coverage: 271.0
  • Bit_score: 215
  • Evalue 1.50e-53
seg (db=Seg db_id=seg from=197 to=208) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null
RRNA_A_DIMETH (db=PatternScan db_id=PS01131 from=31 to=58 evalue=0.0 interpro_id=IPR020596 interpro_description=Ribosomal RNA adenine methylase transferase, conserved site GO=Biological Process: rRNA modification (GO:0000154), Molecular Function: rRNA (adenine-N6,N6-)-dimethyltransferase activity (GO:0000179), Molecular Function: rRNA methyltransferase activity (GO:0008649)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0

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Notes

EC:2.1.1.48 is an outdated EC. KsgA introduces the most highly conserved ribosomal RNA modification, the dimethylation of adenine1518 and adenine1519 in 16S rRNA. Jill Banfield (11/15/12)

Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 810
ATGCCTACAAAACTAGGACAAAACTTTTTGAAAGATCCTGCTATTTTGGAAAAAATCATCCAATCATCAGACATCACTGATATTAATTTTGTATTGGAAATCGGTCCGGGAAAAGGAGTTTTAACCGAAAAGCTAGCCGAGCTTGGAAAAAAAATTATTGCCGTTGAGCTAGATGACGCATTAATTCCTTATTTAAAGCATAAGTTCTCACCAAACAAAAATGTAGAAATCATCCATGAAGATATTTTAAGAACAAATTTGCCGGCATTAATAGAAAAATATGCAACGCGCATGCAGGATTCAAGTTGCAAATCAGGCATACAATATAAAGTAATCGCCAATATCCCTTATTATATAACTTCTCCTATCATAAGACTCTTTCTTGAGCAACTGATCCAGCCTAAAGAAATGATTCTCATGATCCAAAAGGAAGTAGCTCAAAGAATTGTGGCGGCAAAAGGACAGATGAGCATTTTGGCGGTTTCTGTAGGATATTATGCCAGCGCAGAAATTCTTTTTGATGTAGATAAGAATGCATTTTCCCCTGTTCCAAAAGTAGACAGTTCGGTTATAAAAATAGTTCCTCAAAAAAAATTCAACAAAGAAGAAGATAAAAAATTCTTTAGAATAGTCAAGGCTGGATTTTGCTCCAAAAGAAAGACGCTTCTTAATAATCTTTCCACCAGCCTGAAAATAAAAAAAGAGACAATAGAAGAAATATTGTCTTTAGTGTCTTTAGATAAAAATGTTCGGGCCCAGGAATTAACTGTTAATGATTGGAAAAGGCTATTTGATCATATCAGCAAATAA
PROTEIN sequence
Length: 270
MPTKLGQNFLKDPAILEKIIQSSDITDINFVLEIGPGKGVLTEKLAELGKKIIAVELDDALIPYLKHKFSPNKNVEIIHEDILRTNLPALIEKYATRMQDSSCKSGIQYKVIANIPYYITSPIIRLFLEQLIQPKEMILMIQKEVAQRIVAAKGQMSILAVSVGYYASAEILFDVDKNAFSPVPKVDSSVIKIVPQKKFNKEEDKKFFRIVKAGFCSKRKTLLNNLSTSLKIKKETIEEILSLVSLDKNVRAQELTVNDWKRLFDHISK*