ggKbase home page

ACD18_1_3

Organism: ACD18

near complete RP 50 / 55 MC: 17 BSCG 44 / 51 MC: 8 ASCG 0 / 38
Location: 1491..2123

Top 3 Functional Annotations

Value Algorithm Source
23S rRNA pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 40.2
  • Coverage: 194.0
  • Bit_score: 139
  • Evalue 8.00e-31
RIBOSOMAL PSEUDOURIDINE SYNTHASE (db=HMMPanther db_id=PTHR10436 from=6 to=201 evalue=1.4e-29) iprscan interpro
DB: HMMPanther
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.40e-29
Pseudouridine synthase (db=superfamily db_id=SSF55120 from=89 to=208 evalue=7.9e-29 interpro_id=IPR020103 interpro_description=Pseudouridine synthase, catalytic domain GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 7.90e-29

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 633
ATGAAAAATACTAAAAATACACAAATTTATCAAGTTCCAGAAGAAAGTCGTCATGAGCGATTGGATGTTTTTTTGGCTCAGGAAATGGGGATTAGTCGTTCCAAAGTACAAAAGCTAATTGAGACAGGTCTGGTCATTCTAGATGGTAGAGAACCAAAAAAGTCTGGTGAAAGATTGACTTCGACAAAACAGGTAGAGGTAAAAGAAGAAGATGCTAGTATAAAAGATGCTGAAAATAAAATAAAAGCTAAAAAACTACCAAAACTAGACATTGTAGCAGACACAGCAGATTATATCGTGGTCAACAAACCTTCGGGTATTTTGGTACATCCTACACAAGCTGGAGAAACTGATACTTTGGTCAATATGTTGCTGGTCAAATACCCTGAAATAAAAAAAGTTGGTGAAGCCGAAGTCCGACCTGGTATTGTCCATCGTCTCGATAAAGATGCTTCAGGTTTGCTTGTCATTGCTCGCACCCAAAAAAGTTTTGAAAATCTAAAGAAACAATTTCAAGATAGAGAAGTGGACAAAATATATAGTGTGCTTGTCTACGGCAATTTTGTTGAAGATAGTGGACAAATAGATTTTGAAATTGACAGGGGTGGCGATGGACGTATGGTTTCTCGACCT
PROTEIN sequence
Length: 211
MKNTKNTQIYQVPEESRHERLDVFLAQEMGISRSKVQKLIETGLVILDGREPKKSGERLTSTKQVEVKEEDASIKDAENKIKAKKLPKLDIVADTADYIVVNKPSGILVHPTQAGETDTLVNMLLVKYPEIKKVGEAEVRPGIVHRLDKDASGLLVIARTQKSFENLKKQFQDREVDKIYSVLVYGNFVEDSGQIDFEIDRGGDGRMVSRP