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ACD18_7_2

Organism: ACD18

near complete RP 50 / 55 MC: 17 BSCG 44 / 51 MC: 8 ASCG 0 / 38
Location: comp(1317..2081)

Top 3 Functional Annotations

Value Algorithm Source
rluF; ribosomal large subunit pseudouridine synthase F RluF (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 43.0
  • Coverage: 251.0
  • Bit_score: 191
  • Evalue 3.60e-46
PSI_RSU (db=PatternScan db_id=PS01149 from=124 to=138 evalue=0.0 interpro_id=IPR018496 interpro_description=Pseudouridine synthase, RsuA and RluB/E/F, conserved site GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: intramolecular transferase activity (GO:0016866)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0
RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE B (db=HMMPanther db_id=PTHR21600:SF2 from=7 to=254 evalue=2.1e-61) iprscan interpro
DB: HMMPanther
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.10e-61

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Taxonomy

RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated → Magasanikbacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 765
ATGCTCGTTCGTCTCCAAAAACACATCGCAGATTTAGGAATTTGTTCTCGTCGCAAGGCTGAAGAACTTATTTTGGCTAAAAAAATAAAAGTAAATGGAAAGTTGATTACAGAAATGGGTGTAAAAGTGGATCCAAGTGCTGACAAAGTAGAAGTTTTGGATAACAAAATTACTGGTAAAACTTTCAAACCAGAAAAAAGACAAGCTATTGATTTTTCAAAAAATTCCAAAATTTATATTGCTCTCAATAAACCTGTTGGCTATATTAGTAGTGCTTCTAGTGAACAAGGTATGTCAGTTTTAGATTTGATTACACCTCAAAATTGTGTGATGAAAGGACAAAAAATGACAACTAGAGTTTATCCTGTTGGTAGATTAGACAAAGATTCAGAAGGTCTGATTCTACTCACAAATGATGGAGAATTGACTAACCAAATTACCCATCCTAGTTTCGAACATGAAAAAGAATATGAAATTACTATTGATAATTTTTTGACCAAAGATGCTATAAAAGTTTTGACAACAGGAATGATGTTGGCTGATGAATATGTCCAAGGTATTCAAATTTTGAAAGAATTTAAAAATGGTAGAAGAAGTATTGTAACAGCTATTTTGACAGAAGGAAAAAATCGTCAGATTAGAAAAATGTTTGGTAATATTGGTTATAATGTGCAATCTCTTCGTCGTACTAGAATAAATAAGTTGAGACTTGGTATTTTGCCAGTGGGAAAGTGGAAGTACGTGGATAAAAGTAAGATTATTTAG
PROTEIN sequence
Length: 255
MLVRLQKHIADLGICSRRKAEELILAKKIKVNGKLITEMGVKVDPSADKVEVLDNKITGKTFKPEKRQAIDFSKNSKIYIALNKPVGYISSASSEQGMSVLDLITPQNCVMKGQKMTTRVYPVGRLDKDSEGLILLTNDGELTNQITHPSFEHEKEYEITIDNFLTKDAIKVLTTGMMLADEYVQGIQILKEFKNGRRSIVTAILTEGKNRQIRKMFGNIGYNVQSLRRTRINKLRLGILPVGKWKYVDKSKII*