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ACD18

Rifle_ACD_RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated_32_1
In projects: Rifle_ACD  |  all_cpr_genomes  |  ggK_CPR

Consensus taxonomy: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated  →  Magasanikbacteria  →  Parcubacteria  →  Bacteria

Metagenomic Context

Properties

Avg. coverage: 1.00 Longest contig: 43.39 Kbp Bin length: 1.28 Mbp GC content: 31.95 %
Contigs count: 188 Features count: 1286 rRNAs count: 0 tRNAs count: 0

Genome completeness

near complete RP 50 / 55 MC: 17 BSCG 44 / 51 MC: 8 ASCG 0 / 38

Description

OD1

Displaying items 1-50 of 188 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
ACD18_134 ACD18_11362.2160.5
Species: ACD18 (50%)
2 2194 bp 28.81 1.00 100.09
done Jill Banfield (11/15/12)
ACD18_183 ACD18_4624.2955.17
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (100%)
1 2995 bp 38.40 1.00 99.97
done Jill Banfield (11/15/12)
ACD18_187 ACD18_55429.1982.6
Species: uncultured bacterium (100%)
2 2016 bp 30.61 1.00 99.55
done Jill Banfield (11/15/12)
ACD18_153 ACD18_305239.2954.6
Species: uncultured bacterium (66.67%)
3 2988 bp 32.76 1.00 99.40
done Jill Banfield (11/15/12)
ACD18_66 ACD18_23735.4126.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (100%)
6 4166 bp 31.57 1.00 98.58
done Jill Banfield (11/15/12)
ACD18_32 ACD18_24801.2867.5
Species: uncultured bacterium (100%)
4 2901 bp 33.44 1.00 98.45
done Jill Banfield (11/15/12)
ACD18_110 ACD18_1193.5388.23
Species: uncultured bacterium (50%)
6 5428 bp 31.41 1.00 98.43
done Jill Banfield (11/15/12)
ACD18_58 ACD18_1753.2742.23
Species: uncultured bacterium (75%)
4 2788 bp 30.24 1.00 98.35
done Jill Banfield (11/15/12)
ACD18_154 ACD18_149.4560.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (50%)
4 4606 bp 32.46 1.00 97.83
done Jill Banfield (11/15/12)
ACD18_86 ACD18_29943.2094.6
Species: uncultured bacterium (100%)
2 2128 bp 33.55 1.00 97.13
done Jill Banfield (11/15/12)
ACD18_175 ACD18_31582.2459.5
Species: uncultured bacterium (100%)
2 2493 bp 33.61 1.00 96.87
done Jill Banfield (11/15/12)
ACD18_140 ACD18_176426.5817.6
Species: uncultured bacterium (57.14%)
7 5851 bp 27.14 1.00 96.70
done Jill Banfield (11/15/12)
ACD18_174 ACD18_10983.4596.19
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (50%)
2 4636 bp 33.69 1.00 96.23
done Jill Banfield (11/15/12)
ACD18_41 ACD18_425.5690.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (85.71%)
7 5730 bp 32.84 1.00 96.18
done Jill Banfield (11/15/12)
ACD18_44 ACD18_3480.5304.5
Species: uncultured bacterium (100%)
7 5338 bp 30.74 1.00 96.16
done Jill Banfield (11/15/12)
ACD18_182 ACD18_6286.2675.20
Species: uncultured bacterium (100%)
2 2715 bp 36.46 1.00 95.47
done Jill Banfield (11/15/12)
ACD18_72 ACD18_61444.3138.6
Species: uncultured bacterium (100%)
4 3172 bp 29.26 1.00 95.43
done Jill Banfield (11/15/12)
ACD18_167 ACD18_1180.5731.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (83.33%)
6 5771 bp 34.69 1.00 95.29
done Jill Banfield (11/15/12)
ACD18_33 ACD18_1774.4492.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (66.67%)
6 4532 bp 30.91 1.00 95.19
done Jill Banfield (11/15/12)
ACD18_80 ACD18_789.11094.20
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (66.67%)
3 11134 bp 34.17 1.00 95.11
done Jill Banfield (11/15/12)
ACD18_54 ACD18_230.4448.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (100%)
4 4488 bp 30.79 1.00 95.05
done Jill Banfield (11/15/12)
ACD18_188 ACD18_61952.2100.5
Species: uncultured bacterium (100%)
1 2134 bp 28.35 1.00 94.89
done Jill Banfield (11/15/12)
ACD18_13 ACD18_73881.2575.5
Species: uncultured bacterium (100%)
4 2609 bp 32.31 1.00 94.86
done Jill Banfield (11/15/12)
ACD18_168 ACD18_354327.4380.4
Species: RIFOXYA2_FULL_OD1_Magasanikbacteria_44_8_curated (50%)
2 4414 bp 38.17 1.00 94.81
done Jill Banfield (11/15/12)
ACD18_51 ACD18_3123.4790.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (71.43%)
7 4836 bp 31.12 1.00 94.73
done Jill Banfield (11/15/12)
ACD18_142 ACD18_45421.2433.5
Species: uncultured bacterium (100%)
3 2467 bp 30.77 1.00 94.49
done Jill Banfield (11/15/12)
ACD18_64 ACD18_307.15662.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (90%)
10 15702 bp 32.38 1.00 94.44
done Jill Banfield (11/15/12)
ACD18_118 ACD18_1610.4648.22
Species: uncultured bacterium (71.43%)
7 4694 bp 28.38 1.00 94.40
done Jill Banfield (11/15/12)
ACD18_162 ACD18_894.2224.20
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (50%)
2 2264 bp 36.09 1.00 94.21
done Jill Banfield (11/15/12)
ACD18_135 ACD18_111108.4419.5
Species: uncultured bacterium (57.14%)
7 4453 bp 31.30 1.00 94.18
done Jill Banfield (11/15/12)
ACD18_104 ACD18_1209.1972.22
Species: uncultured bacterium (100%)
2 2018 bp 31.32 1.00 94.10
done Jill Banfield (11/15/12)
ACD18_115 ACD18_67308.7508.5
Species: uncultured bacterium (85.71%)
7 7542 bp 31.65 1.00 94.03
done Jill Banfield (11/15/12)
ACD18_96 ACD18_1277.7831.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (77.78%)
9 7871 bp 30.78 1.00 93.69
done Jill Banfield (11/15/12)
ACD18_78 ACD18_580.6818.23
Species: uncultured bacterium (100%)
6 6858 bp 31.58 1.00 93.48
done Jill Banfield (11/15/12)
ACD18_49 ACD18_21787.35852.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (80.77%)
26 35892 bp 31.75 1.00 93.44
done Jill Banfield (11/15/12)
ACD18_73 ACD18_107428.2116.5
Species: uncultured bacterium (66.67%)
3 2150 bp 30.56 1.00 93.35
done Jill Banfield (11/15/12)
ACD18_26 ACD18_459.6426.19
Species: uncultured bacterium (100%)
4 6466 bp 35.26 1.00 93.21
done Jill Banfield (11/15/12)
ACD18_166 ACD18_1803.12972.23
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (80%)
10 13012 bp 32.69 1.00 93.19
done Jill Banfield (11/15/12)
ACD18_158 ACD18_39124.2976.6
Species: uncultured bacterium (100%)
3 3010 bp 27.04 1.00 93.09
done Jill Banfield (11/15/12)
ACD18_77 ACD18_863.12635.23
Species: uncultured bacterium (55.56%)
9 12675 bp 32.64 1.00 93.04
done Jill Banfield (11/15/12)
ACD18_74 ACD18_123610.2209.5
Species: uncultured bacterium (100%)
2 2243 bp 32.68 1.00 92.82
done Jill Banfield (11/15/12)
ACD18_56 ACD18_8207.6123.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (71.43%)
7 6163 bp 30.52 1.00 92.73
done Jill Banfield (11/15/12)
ACD18_15 ACD18_3062.4996.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (71.43%)
7 5042 bp 30.35 1.00 92.70
done Jill Banfield (11/15/12)
ACD18_59 ACD18_28437.2186.5
Species: uncultured bacterium (100%)
3 2220 bp 31.13 1.00 92.57
done Jill Banfield (11/15/12)
ACD18_143 ACD18_8988.9158.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (100%)
4 9198 bp 32.56 1.00 92.56
done Jill Banfield (11/15/12)
ACD18_30 ACD18_770.43352.24
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (66.67%)
33 43392 bp 30.20 1.00 92.26
done Jill Banfield (11/15/12)
ACD18_139 ACD18_1056.6448.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (75%)
4 6488 bp 34.03 1.00 92.15
done Jill Banfield (11/15/12)
ACD18_132 ACD18_1539.6751.21
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (60%)
5 6797 bp 30.66 1.00 92.11
done Jill Banfield (11/15/12)
ACD18_113 ACD18_505.2402.21
Species: uncultured bacterium (50%)
2 2448 bp 31.05 1.00 91.91
done Jill Banfield (11/15/12)
ACD18_36 ACD18_1371.18886.22
Species: RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated (63.64%)
22 18926 bp 33.21 1.00 91.72
done Jill Banfield (11/15/12)
Displaying items 1-50 of 188 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.