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SCN_Comamonas_36x

SCN-stock_Burkholderiales_67_35
In projects: SCN-stock  |  SCN_92

Consensus taxonomy: Burkholderiales  →  Betaproteobacteria  →  Proteobacteria  →  Bacteria

Description

Full 51, connected

Displaying 38 items
contig # features sequence size GC content (%) Cov Coding Density (%)
cnbg_combo_scaffold_73 Acv36_1
Order: Burkholderiales (82.95%)
352 370557 bp 68.06 35.54 93.49
cnbg_combo_scaffold_55 Acv36_2
Order: Burkholderiales (88.77%)
276 277628 bp 66.20 35.23 92.12
cnbg_combo_scaffold_20 Acv36_3
Order: Burkholderiales (77.45%)
204 215825 bp 65.21 33.32 92.48
cnbg_combo_scaffold_33 Acv36_5
Order: Burkholderiales (79.69%)
192 196697 bp 66.77 35.86 92.03
cnbg_combo_scaffold_26 Acv36_6
Order: Burkholderiales (80.11%)
186 188508 bp 67.01 35.91 91.87
cnbg_combo_scaffold_22 Acv36_4
Order: Burkholderiales (79.35%)
184 203035 bp 66.18 34.93 88.22
cnbg_combo_scaffold_34 Acv36_7
Order: Burkholderiales (91.07%)
168 170992 bp 66.78 34.67 93.50
cnbg_combo_scaffold_38 Acv36_8
Order: Burkholderiales (86.27%)
153 156007 bp 66.33 36.07 93.27
cnbg_combo_scaffold_112 Acv36_9
Order: Burkholderiales (71.53%)
137 141012 bp 65.20 36.49 89.64
cnbg_combo_scaffold_90 Acv36_10
Order: Burkholderiales (90.74%)
108 130916 bp 67.53 36.59 94.43
cnbg_combo_scaffold_100 Acv36_12
Order: Burkholderiales (78.85%)
104 107507 bp 67.22 36.57 92.95
cnbg_combo_scaffold_81 Acv36_11
Order: Burkholderiales (83.33%)
102 117548 bp 64.85 33.48 90.80
cnbg_combo_scaffold_107 Acv36_14
Order: Burkholderiales (84.04%)
94 104232 bp 66.66 36.66 92.54
cnbg_combo_scaffold_200 Acv36_13
Order: Burkholderiales (81.72%)
93 106004 bp 65.66 35.28 90.71
cnbg_combo_scaffold_336 Acv36_15
Order: Burkholderiales (89.41%)
85 90861 bp 66.86 34.44 93.50
cnbg_combo_scaffold_154 Acv36_16
Order: Burkholderiales (94.44%)
72 81418 bp 66.82 37.33 93.09
cnbg_combo_scaffold_168 Acv36_17
Order: Burkholderiales (80%)
70 76891 bp 66.64 35.71 89.07
cnbg_combo_scaffold_259 Acv36_20
Order: Burkholderiales (91.43%)
70 57127 bp 64.31 32.14 92.20
cnbg_combo_scaffold_414 Acv36_22
Genus: Acidovorax (50.94%)
53 46669 bp 65.95 32.31 90.72
cnbg_combo_scaffold_254 Acv36_19
Order: Burkholderiales (92.31%)
52 58026 bp 66.86 36.24 93.40
cnbg_combo_scaffold_233 Acv36_18
Order: Burkholderiales (76.47%)
51 64125 bp 67.14 35.69 93.85
cnbg_combo_scaffold_354 Acv36_23
Order: Burkholderiales (79.55%)
44 45082 bp 65.15 34.30 91.59
cnbg_combo_scaffold_286 Acv36_21
Order: Burkholderiales (85%)
40 52704 bp 66.07 35.00 95.13
cnbg_combo_scaffold_494 Acv36_24
Genus: Acidovorax (52.94%)
34 33143 bp 67.95 34.18 93.78
cnbg_combo_scaffold_566 Acv36_26
Order: Burkholderiales (80.65%)
31 28773 bp 66.35 35.42 92.32
cnbg_combo_scaffold_954 Acv36_27
Genus: Acidovorax (67.74%)
31 28299 bp 66.90 36.23 91.19
cnbg_combo_scaffold_559 Acv36_25
Order: Burkholderiales (84.62%)
26 29253 bp 67.23 34.76 89.85
cnbg_combo_scaffold_614 Acv36_28
Order: Burkholderiales (80%)
25 25497 bp 67.73 38.59 97.22
cnbg_combo_scaffold_1281 Acv36_32
Order: Burkholderiales (58.33%)
24 11041 bp 66.54 38.69 96.40
cnbg_combo_scaffold_702 Acv36_35
Species: Alicycliphilus denitrificans (70%)
20 23219 bp 64.56 35.43 88.56
cnbg_combo_scaffold_709 Acv36_29
Genus: Acidovorax (65%)
20 21258 bp 65.40 36.09 92.96
cnbg_combo_scaffold_1006 Acv36_38
Order: Burkholderiales (50%)
18 13934 bp 65.76 32.65 90.02
cnbg_combo_scaffold_997 Acv36_33
Order: Burkholderiales (100%)
17 14974 bp 68.49 36.08 92.90
cnbg_combo_scaffold_681 Acv36_34
Order: Burkholderiales (86.67%)
15 22395 bp 69.62 38.16 92.47
cnbg_combo_scaffold_866 Acv36_30
Genus: Acidovorax (76.92%)
13 16304 bp 68.57 37.23 96.11
cnbg_combo_scaffold_1671 Acv36_36
Genus: Acidovorax (55.56%)
9 8384 bp 64.87 32.29 94.00
cnbg_combo_scaffold_1178 Acv36_37
Order: Burkholderiales (77.78%)
9 11569 bp 67.89 37.47 94.55
cnbg_combo_scaffold_1166 Acv36_31
Order: Burkholderiales (100%)
7 11775 bp 68.90 38.04 91.62
Displaying 38 items

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.