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SCN18_10_11_15_R1_P_scaffold_9727_1

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(3..1148)

Top 3 Functional Annotations

Value Algorithm Source
Isocitrate dehydrogenase {ECO:0000313|EMBL:AHY57397.1}; EC=1.1.1.42 {ECO:0000313|EMBL:AHY57397.1};; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.2
  • Coverage: 382.0
  • Bit_score: 664
  • Evalue 6.40e-188
isocitrate dehydrogenase (EC:1.1.1.42) similarity KEGG
DB: KEGG
  • Identity: 86.1
  • Coverage: 382.0
  • Bit_score: 655
  • Evalue 6.00e-186
isocitrate dehydrogenase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D52D1D similarity UNIREF
DB: UNIREF100
  • Identity: 89.0
  • Coverage: 382.0
  • Bit_score: 675
  • Evalue 2.60e-191

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1146
CTGCAGGACGGGCAGAAGATCAGCGACGACCTGGCCGAGCTGGGCGAACTGGCGACCCAGCCGGAAGCCAACATCATCAAGCTGCCCAACATCAGCGCCTCGGTGCCGCAGCTCAAGGCCGCGATCAAGGAACTGCAGGACCAGGGTTACGCGCTGCCGAACTACCCGGACGCGCCGGCCGACGACGTTTCGCGCGACATCAAGGCGCGCTACGACAAGGTCAAGGGCAGTGCGGTGAACCCGGTGCTGCGCGAGGGCAACTCGGACCGCCGCGCGACGCTGTCGGTCAAGAACTACGCGCGCAAGCACCCGCACCGCATGGGCGCGTGGAGCGGCGACTCGAAGTCGCACGTCGCGCACATGGACGCCGGCGATTTCTACGGCAGCGAGCAGTCGGCCACCCTGGCCAACGCCGGCAGCCTGAAGATCGAGCTGGTGCAGGACGATGGCAGGACCGTGGTGCTGAAGGACAAGACCGCGGTCAAGGCCGGCGAGATCGTCGATGCCTCGGTGATGTCGCGCCGCGCGCTGGCCGCCTTCGTCGCCGCGCAGATCGAAGATGCCCGCACGCAGGGCGTGCTGTTCTCGCTGCACCTGAAGGCGACCATGATGAAGGTCTCCGACCCGATCATGTTCGGCGTGGTGGTCGAGGAGTTCTACAAGGACGTGCTGGGCAAGTACGCCACCGAGCTCAAGCAGGCCGGCTTCGACCCGAACAACGGCATCGGCGACCTGTACGCGCGCCTGCCGTCGCTGCCGGAAGCCACCCAGGAAGCGATCAAGGCCGATATCGCCGCCGAGTACGCAAAGCGTCCGGCCGTGGCGATGGTCAATTCCGACAAGGGCATCACCAACCTGCACGTGCCCAGCGACGTGATCGTCGACGCTTCGATGCCGGCGATGATCCGCGACAGTGGCCGCATGTGGAATGCCGAAGGCAAGCTGCAGGACACCAAGGCGCTGATCCCGGACCGCTGCTACGCCGGCGTCTACCAGGCGGTGATCGAGGACTGCAAGGCACACGGCGCGTTCGACCCGGCCACCATGGGCTCGGTGCCGAACGTCGGCCTGATGGCGCAGAAGGCCGAGGAGTACGGTAGCCACGACAAGACCTTCCAGATCCCGGCCAACGGCACCGTGCGCGTC
PROTEIN sequence
Length: 382
LQDGQKISDDLAELGELATQPEANIIKLPNISASVPQLKAAIKELQDQGYALPNYPDAPADDVSRDIKARYDKVKGSAVNPVLREGNSDRRATLSVKNYARKHPHRMGAWSGDSKSHVAHMDAGDFYGSEQSATLANAGSLKIELVQDDGRTVVLKDKTAVKAGEIVDASVMSRRALAAFVAAQIEDARTQGVLFSLHLKATMMKVSDPIMFGVVVEEFYKDVLGKYATELKQAGFDPNNGIGDLYARLPSLPEATQEAIKADIAAEYAKRPAVAMVNSDKGITNLHVPSDVIVDASMPAMIRDSGRMWNAEGKLQDTKALIPDRCYAGVYQAVIEDCKAHGAFDPATMGSVPNVGLMAQKAEEYGSHDKTFQIPANGTVRV